Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_003290 16 7355 NP_000851 15 9605 NP_001139288 15 9605 NP_001243234 15 9605 NP_060087 15 9605 NP_000426 15 9605 NP_057329 15 9605 NP_056325 15 9605 NP_115925 15 9605 NP_065880 15 9605 NP_001129392 15 9605 NP_001193486 15 9605 NP_620140 15 9605 XP_005259981 15 9605 XP_005256653 15 9605 XP_005256652 15 9605 XP_006717367 15 9605 XP_005251580 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QILVKNAG 8 QILVKNAG Sbjct: 2796 QILVKNAG 2803>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QILVKNAG 8 QILVKNAG Sbjct: 2788 QILVKNAG 2795>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QILVKNAG 8 QILVKNAG Sbjct: 2749 QILVKNAG 2756>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QILVKNAG 8 QILVKNAG Sbjct: 2828 QILVKNAG 2835>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QILVKNAG 8 QILVKNAG Sbjct: 2841 QILVKNAG 2848>NP_003290 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LVKNAGT 9 LVKN GT Sbjct: 159 LVKNLGT 165>NP_000851 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 87 ILVNNAG 93>NP_001139288 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 87 ILVNNAG 93>NP_001243234 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 87 ILVNNAG 93>NP_060087 Length = 2555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QILVKNAGT 9 QIL++N T Sbjct: 1978 QILIRNRAT 1986>NP_000426 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QILVKNAGT 9 QIL++N T Sbjct: 1889 QILIRNRST 1897>NP_057329 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 116 ILVNNAG 122>NP_056325 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 138 ILVNNAG 144>NP_115925 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QILVKNAGT 9 Q+L +N GT Sbjct: 460 QLLCQNGGT 468>NP_065880 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QILVKNAG 8 Q+LV+N G Sbjct: 834 QLLVRNLG 841>NP_001129392 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QILVKNAG 8 Q+LV+N G Sbjct: 834 QLLVRNLG 841>NP_001193486 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QILVKNAG 8 Q+LV+N G Sbjct: 797 QLLVRNLG 804>NP_620140 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILVKN G Sbjct: 154 ILVKNRG 160>XP_005259981 Length = 2269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QILVKNAGT 9 QIL++N T Sbjct: 1837 QILIRNRST 1845>XP_005256653 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 123 ILVNNAG 129>XP_005256652 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILVKNAG 8 ILV NAG Sbjct: 185 ILVNNAG 191>XP_006717367 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QILVKNAGT 9 Q+L +N GT Sbjct: 494 QLLCQNGGT 502>XP_005251580 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QILVKNAG 8 Q+LV+N G Sbjct: 833 QLLVRNLG 840Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.130 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,779 Number of extensions: 763 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |