Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_001165783 17 2528 NP_002661 17 2528 NP_001138791 17 2528 XP_006713725 17 2528 XP_006713724 17 2528 XP_006713723 17 2528 NP_001158202 17 3301 NP_075063 17 3301 NP_001158204 17 3301 XP_006712141 17 3301 XP_005264562 17 3301 XP_005264560 17 3301 XP_005264559 17 3301 NP_203754 17 4312 XP_006718789 17 4312 XP_006718788 17 4312 XP_005274419 17 4312 XP_005264132 17 4312 NP_056988 17 4312 NP_056023 16 5631 NP_001190985 16 5631 NP_001231611 16 5631 NP_001077094 16 5631 NP_078964 16 5631 NP_055167 16 5631 XP_006722380 16 5631 XP_005258153 16 5631 XP_005258152 16 5631 XP_005258151 16 5631 XP_005258150 16 5631 XP_005258149 16 5631 XP_005252650 16 5631 XP_006717569 16 5631 XP_006717568 16 5631 XP_006717567 16 5631 NP_000072 16 7355 NP_001005191 16 7355 NP_001138883 16 7355 XP_006714236 16 7355 XP_005262948 16 7355 XP_006714235 16 7355 XP_006711794 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_689988 16 7355 NP_444256 15 9605 NP_444254 15 9605 NP_444253 15 9605 NP_444255 15 9605 NP_079021 15 9605 NP_001137502 15 9605 XP_005253056 15 9605 XP_005247551 15 9605 XP_005247550 15 9605 XP_006713712 15 9605 XP_005247549 15 9605 XP_005263696 15 9605 NP_078938 15 9605 NP_055255 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 QIKS+DISE Sbjct: 2292 QIKSRDISE 2300>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 QIKS+DISE Sbjct: 2087 QIKSRDISE 2095>NP_001165783 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>NP_002661 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>NP_001138791 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>XP_006713725 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>XP_006713724 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>XP_006713723 Length = 629 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 ++KSKDIS+ Sbjct: 82 ELKSKDISK 90>NP_001158202 Length = 208 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 34 VKSKDIKE 41>NP_075063 Length = 201 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>NP_001158204 Length = 143 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>XP_006712141 Length = 139 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>XP_005264562 Length = 213 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>XP_005264560 Length = 272 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>XP_005264559 Length = 284 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 +KSKDI E Sbjct: 27 VKSKDIKE 34>NP_203754 Length = 1729 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKSKDISE 9 +KSKD++E Sbjct: 1233 VKSKDLAE 1240>XP_006718789 Length = 1053 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKSKDISE 9 +KSKD++E Sbjct: 557 VKSKDLAE 564>XP_006718788 Length = 1729 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKSKDISE 9 +KSKD++E Sbjct: 1233 VKSKDLAE 1240>XP_005274419 Length = 1808 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IKSKDISE 9 +KSKD++E Sbjct: 1312 VKSKDLAE 1319>XP_005264132 Length = 1219 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 Q++SK++SE Sbjct: 457 QLESKEVSE 465>NP_056988 Length = 1220 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 Q++SK++SE Sbjct: 457 QLESKEVSE 465>NP_056023 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 827 QIKEKDIEK 835>NP_001190985 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 804 QIKEKDIEK 812>NP_001231611 Length = 438 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 QIK++D+S+ Sbjct: 46 QIKTEDLSD 54>NP_001077094 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 804 QIKEKDIEK 812>NP_078964 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 +IK KDIS Sbjct: 238 EIKKKDIS 245>NP_055167 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QIKSKDISE 9 QIK++D+S+ Sbjct: 44 QIKTEDLSD 52>XP_006722380 Length = 1769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 534 QIKEKDIEK 542>XP_005258153 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 802 QIKEKDIEK 810>XP_005258152 Length = 2060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 825 QIKEKDIEK 833>XP_005258151 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 827 QIKEKDIEK 835>XP_005258150 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 827 QIKEKDIEK 835>XP_005258149 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK KDI + Sbjct: 827 QIKEKDIEK 835>XP_005252650 Length = 692 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 +IK KDIS Sbjct: 238 EIKKKDIS 245>XP_006717569 Length = 1278 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 +IK KDIS Sbjct: 824 EIKKKDIS 831>XP_006717568 Length = 1314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 +IK KDIS Sbjct: 860 EIKKKDIS 867>XP_006717567 Length = 1385 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 +IK KDIS Sbjct: 931 EIKKKDIS 938>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKDISE 9 KSKDIS+ Sbjct: 2879 KSKDISK 2885>NP_001005191 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIKSKDIS 8 Q +SKDIS Sbjct: 86 QARSKDIS 93>NP_001138883 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 IKSK ISE Sbjct: 270 IKSKRISE 277>XP_006714236 Length = 771 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 IKSK ISE Sbjct: 237 IKSKRISE 244>XP_005262948 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 IKSK ISE Sbjct: 307 IKSKRISE 314>XP_006714235 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 IKSK ISE Sbjct: 307 IKSKRISE 314>XP_006711794 Length = 3022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKDISE 9 KSKDIS+ Sbjct: 2100 KSKDISK 2106>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKDISE 9 KSKDIS+ Sbjct: 2879 KSKDISK 2885>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKDISE 9 KSKDIS+ Sbjct: 2833 KSKDISK 2839>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KSKDISE 9 KSKDIS+ Sbjct: 2879 KSKDISK 2885>NP_689988 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IKSKDISE 9 IKSK ISE Sbjct: 307 IKSKRISE 314>NP_444256 Length = 1794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 863 QVKPKTVSE 871>NP_444254 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 863 QVKPKTVSE 871>NP_444253 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 932 QVKPKTVSE 940>NP_444255 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 932 QVKPKTVSE 940>NP_079021 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 QIK K +SE Sbjct: 627 QIKKKRLSE 635>NP_001137502 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QIKSKDISE 9 ++KS D+SE Sbjct: 882 KLKSMDLSE 890>XP_005253056 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QIKSKDISE 9 ++KS D+SE Sbjct: 954 KLKSMDLSE 962>XP_005247551 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 873 QVKPKTVSE 881>XP_005247550 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 942 QVKPKTVSE 950>XP_006713712 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 942 QVKPKTVSE 950>XP_005247549 Length = 1924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K K +SE Sbjct: 942 QVKPKTVSE 950>XP_005263696 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K KDI + Sbjct: 86 QLKEKDIMD 94>NP_078938 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QIKSKDISE 9 ++KS D+SE Sbjct: 954 KLKSMDLSE 962>NP_055255 Length = 158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QIKSKDISE 9 Q+K KDI + Sbjct: 86 QLKEKDIMD 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.116 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,210 Number of extensions: 754 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |