Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 XP_006726596 17 3301 XP_006718819 17 3301 XP_006710011 17 3301 NP_001804 17 4312 NP_001273663 17 4312 NP_036428 16 5631 NP_536739 16 5631 NP_002030 16 5631 NP_997006 16 5631 NP_055793 16 5631 NP_054828 16 5631 XP_006718816 16 5631 XP_005262939 16 5631 XP_005262938 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_596870 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_000020 16 7355 NP_057195 16 7355 NP_001005169 16 7355 NP_001005170 16 7355 XP_006721056 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_002213 15 9605 NP_001093422 15 9605 NP_001161744 15 9605 NP_001273004 15 9605 NP_004311 15 9605 NP_775293 15 9605 NP_001123520 15 9605 NP_056111 15 9605 NP_077734 15 9605 NP_054829 15 9605 XP_006720004 15 9605 XP_005254093 15 9605 XP_006720003 15 9605 XP_006720002 15 9605 XP_006720000 15 9605 XP_005254091 15 9605 XP_006719999 15 9605 XP_006719998 15 9605 XP_006719997 15 9605 XP_006719996 15 9605 XP_006719995 15 9605 XP_006719994 15 9605 XP_006719992 15 9605 XP_006719991 15 9605 XP_006719990 15 9605 XP_006719989 15 9605 XP_006719988 15 9605 XP_006719987 15 9605 XP_006719986 15 9605 XP_006719985 15 9605 XP_006713198 15 9605 XP_006713197 15 9605 XP_005265167 15 9605 XP_006713196 15 9605 XP_006713195 15 9605 XP_005265166 15 9605 XP_006713194 15 9605 XP_005245325 15 9605 XP_005245324 15 9605 NP_003189 15 9605 NP_001005186 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QIDSSISFN 9 QIDSS+SFN Sbjct: 1654 QIDSSVSFN 1662>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QIDSSISFN 9 QIDSS+SFN Sbjct: 1654 QIDSSVSFN 1662>XP_006726596 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 ++SSISFN Sbjct: 59 VNSSISFN 66>XP_006718819 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 ++SSISFN Sbjct: 59 VNSSISFN 66>XP_006710011 Length = 242 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 ++SSISFN Sbjct: 59 VNSSISFN 66>NP_001804 Length = 2701 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIDSSISFN 9 Q+D S SFN Sbjct: 40 QVDGSKSFN 48>NP_001273663 Length = 2580 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QIDSSISFN 9 Q+D S SFN Sbjct: 40 QVDGSKSFN 48>NP_036428 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 30 QVDAGLTFN 38>NP_536739 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 68 QVDAGLTFN 76>NP_002030 Length = 694 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 67 QVDAGLTFN 75>NP_997006 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 67 QVDAGLTFN 75>NP_055793 Length = 1222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IDSSISF 8 +DSSISF Sbjct: 961 LDSSISF 967>NP_054828 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+DSS+ F+ Sbjct: 418 QLDSSVRFD 426>XP_006718816 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 30 QVDAGLTFN 38>XP_005262939 Length = 721 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 67 QVDAGLTFN 75>XP_005262938 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 Q+D+ ++FN Sbjct: 67 QVDAGLTFN 75>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 936 QIESSIDF 943>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 936 QIESSIDF 943>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 982 QIESSIDF 989>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 982 QIESSIDF 989>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 982 QIESSIDF 989>NP_000020 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +DS+++FN Sbjct: 272 VDSTLAFN 279>NP_057195 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IDSSISF 8 +DSS+SF Sbjct: 207 LDSSVSF 213>NP_001005169 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSSISFN 9 DSSISF+ Sbjct: 93 DSSISFS 99>NP_001005170 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DSSISFN 9 DSSISF+ Sbjct: 119 DSSISFS 125>XP_006721056 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IDSSISF 8 +DSS+SF Sbjct: 207 LDSSVSF 213>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 983 QIESSIDF 990>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 983 QIESSIDF 990>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 982 QIESSIDF 989>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QIDSSISF 8 QI+SSI F Sbjct: 936 QIESSIDF 943>NP_002213 Length = 2695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2222 SSISFN 2227>NP_001093422 Length = 2710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2237 SSISFN 2242>NP_001161744 Length = 2743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2270 SSISFN 2275>NP_001273004 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSSISFN 9 DSS+ FN Sbjct: 297 DSSLDFN 303>NP_004311 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSSISFN 9 DSS+ FN Sbjct: 422 DSSLDFN 428>NP_775293 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DSSISFN 9 DSS+ FN Sbjct: 422 DSSLDFN 428>NP_001123520 Length = 2068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1368 LDNSLTFN 1375>NP_056111 Length = 2069 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1369 LDNSLTFN 1376>NP_077734 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IDSSISFN 9 +DS ++FN Sbjct: 548 VDSGLTFN 555>NP_054829 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IDSSISF 8 IDS++SF Sbjct: 111 IDSTVSF 117>XP_006720004 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_005254093 Length = 2046 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1369 LDNSLTFN 1376>XP_006720003 Length = 2058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1320 LDNSLTFN 1327>XP_006720002 Length = 2058 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1320 LDNSLTFN 1327>XP_006720000 Length = 2084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1369 LDNSLTFN 1376>XP_005254091 Length = 2093 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1392 LDNSLTFN 1399>XP_006719999 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1380 LDNSLTFN 1387>XP_006719998 Length = 2103 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719997 Length = 2104 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719996 Length = 2104 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719995 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1368 LDNSLTFN 1375>XP_006719994 Length = 2107 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1369 LDNSLTFN 1376>XP_006719992 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719991 Length = 2118 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1380 LDNSLTFN 1387>XP_006719990 Length = 2118 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719989 Length = 2127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719988 Length = 2129 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1391 LDNSLTFN 1398>XP_006719987 Length = 2130 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1392 LDNSLTFN 1399>XP_006719986 Length = 2139 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006719985 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IDSSISFN 9 +D+S++FN Sbjct: 1403 LDNSLTFN 1410>XP_006713198 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2226 SSISFN 2231>XP_006713197 Length = 2712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2239 SSISFN 2244>XP_005265167 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2246 SSISFN 2251>XP_006713196 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2248 SSISFN 2253>XP_006713195 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2254 SSISFN 2259>XP_005265166 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2262 SSISFN 2267>XP_006713194 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 2263 SSISFN 2268>XP_005245325 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IDSSISFN 9 +DS ++FN Sbjct: 488 VDSGLTFN 495>XP_005245324 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IDSSISFN 9 +DS ++FN Sbjct: 511 VDSGLTFN 518>NP_003189 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSISFN 9 SSISFN Sbjct: 737 SSISFN 742>NP_001005186 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QIDSSISFN 9 ++ SSI+FN Sbjct: 267 KVTSSINFN 275Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.124 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,399 Number of extensions: 538 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |