Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 XP_006717989 20 299 NP_056060 17 4312 NP_001035882 17 4312 NP_001265154 17 4312 NP_060457 17 4312 XP_006717975 17 4312 XP_005270017 17 4312 XP_005270016 17 4312 XP_005270014 17 4312 XP_005270013 17 4312 XP_005270012 17 4312 XP_006717974 17 4312 XP_005270010 17 4312 XP_005270009 17 4312 XP_006715101 17 4312 XP_006715100 17 4312 XP_005249021 17 4312 XP_006715099 17 4312 XP_006715098 17 4312 XP_006715097 17 4312 XP_006715096 17 4312 NP_056379 16 5631 NP_597722 16 5631 NP_001273965 16 5631 NP_003244 16 7355 NP_008966 16 7355 XP_005261097 16 7355 XP_005261096 16 7355 XP_005261095 16 7355 XP_005261094 16 7355 NP_001002907 16 7355 NP_001367 15 9605 NP_004123 15 9605 NP_001171131 15 9605 NP_001026909 15 9605 NP_078928 15 9605 XP_006724528 15 9605 XP_005274503 15 9605 XP_005255036 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QHTQITKV 8 QHTQITKV Sbjct: 396 QHTQITKV 403>XP_006717989 Length = 388 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QHTQITKV 8 QHTQITKV Sbjct: 381 QHTQITKV 388>NP_056060 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 161 HTEVVKVL 168>NP_001035882 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 237 QHLEVTKV 244>NP_001265154 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 213 QHLEVTKV 220>NP_060457 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 306 QHLEVTKV 313>XP_006717975 Length = 405 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 306 QHLEVTKV 313>XP_005270017 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 272 QHLEVTKV 279>XP_005270016 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 306 QHLEVTKV 313>XP_005270014 Length = 572 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 237 QHLEVTKV 244>XP_005270013 Length = 585 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 306 QHLEVTKV 313>XP_005270012 Length = 590 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 255 QHLEVTKV 262>XP_006717974 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 271 QHLEVTKV 278>XP_005270010 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 272 QHLEVTKV 279>XP_005270009 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 QH ++TKV Sbjct: 305 QHLEVTKV 312>XP_006715101 Length = 1150 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 161 HTEVVKVL 168>XP_006715100 Length = 1151 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 161 HTEVVKVL 168>XP_005249021 Length = 1155 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 182 HTEVVKVL 189>XP_006715099 Length = 1156 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 182 HTEVVKVL 189>XP_006715098 Length = 1161 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 182 HTEVVKVL 189>XP_006715097 Length = 1171 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 182 HTEVVKVL 189>XP_006715096 Length = 1172 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 182 HTEVVKVL 189>NP_056379 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 +H Q+TK+ Sbjct: 213 EHNQLTKI 220>NP_597722 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HTQITKV 8 HT ITK+ Sbjct: 443 HTDITKI 449>NP_001273965 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HTQITKV 8 HT ITK+ Sbjct: 471 HTDITKI 477>NP_003244 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 1149 HTKVPKVL 1156>NP_008966 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HTQITKV 8 H Q+TKV Sbjct: 271 HNQLTKV 277>XP_005261097 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 1149 HTKVPKVL 1156>XP_005261096 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 1149 HTKVPKVL 1156>XP_005261095 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 1149 HTKVPKVL 1156>XP_005261094 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 HT++ KVL Sbjct: 1149 HTKVPKVL 1156>NP_001002907 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HTQITKV 8 HT +TKV Sbjct: 9 HTAVTKV 15>NP_001367 Length = 4646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHTQITKV 8 Q+TQIT + Sbjct: 4062 QNTQITSI 4069>NP_004123 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 +TQ+TK L Sbjct: 540 YTQVTKFL 547>NP_001171131 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HTQITKVL 9 +TQ+TK L Sbjct: 514 YTQVTKFL 521>NP_001026909 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QHTQITKVL 9 QH +ITK++ Sbjct: 274 QHHKITKLV 282>NP_078928 Length = 2015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QHTQITKVL 9 QH Q K+L Sbjct: 1905 QHLQAVKIL 1913>XP_006724528 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QHTQITKVL 9 QH +ITK++ Sbjct: 245 QHHKITKLV 253>XP_005274503 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QHTQITKVL 9 QH +ITK++ Sbjct: 274 QHHKITKLV 282>XP_005255036 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QHTQITKVL 9 QH Q K+L Sbjct: 1200 QHLQAVKIL 1208Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.125 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,408 Number of extensions: 499 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |