Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 17 4312 NP_001263689 17 4312 NP_001119584 17 4312 NP_001119586 17 4312 NP_001263625 17 4312 NP_001119590 17 4312 NP_001263690 17 4312 NP_001119585 17 4312 NP_001263624 17 4312 NP_001119588 17 4312 NP_001119587 17 4312 NP_001119589 17 4312 NP_001263627 17 4312 NP_001263628 17 4312 NP_001263626 17 4312 NP_660213 16 5631 NP_004283 16 5631 NP_065145 16 7355 NP_060487 16 7355 XP_005269994 16 7355 NP_001265853 15 9605 NP_001244073 15 9605 NP_001244074 15 9605 NP_001121646 15 9605 NP_689651 15 9605 NP_085911 15 9605 NP_004390 15 9605 XP_006719115 15 9605 XP_005253390 15 9605 XP_006719114 15 9605 XP_006719113 15 9605 XP_006719112 15 9605 XP_006719111 15 9605 XP_006719110 15 9605 XP_006719109 15 9605 XP_006719108 15 9605 XP_006719107 15 9605 XP_005253388 15 9605 XP_006719106 15 9605 XP_006719105 15 9605 XP_006719104 15 9605 XP_006714366 15 9605 XP_006714365 15 9605 NP_003351 15 9605>NP_000537 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 192 QHLIRVE 198>NP_001263689 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 153 QHLIRVE 159>NP_001119584 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 192 QHLIRVE 198>NP_001119586 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 192 QHLIRVE 198>NP_001263625 Length = 302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 153 QHLIRVE 159>NP_001119590 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 153 QHLIRVE 159>NP_001263690 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 153 QHLIRVE 159>NP_001119585 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 192 QHLIRVE 198>NP_001263624 Length = 307 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 153 QHLIRVE 159>NP_001119588 Length = 209 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 60 QHLIRVE 66>NP_001119587 Length = 261 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 60 QHLIRVE 66>NP_001119589 Length = 214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 60 QHLIRVE 66>NP_001263627 Length = 182 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 33 QHLIRVE 39>NP_001263628 Length = 187 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 33 QHLIRVE 39>NP_001263626 Length = 234 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 QHLIRV+ Sbjct: 33 QHLIRVE 39>NP_660213 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QHLIRVK 7 +HLIR+K Sbjct: 114 KHLIRIK 120>NP_004283 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QHLIRVKF 8 QHL+RV + Sbjct: 625 QHLLRVAY 632>NP_065145 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QHLIRVKFA 9 +HL +KFA Sbjct: 6 KHLFNLKFA 14>NP_060487 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HLIRVKFA 9 H+I+VK+A Sbjct: 388 HVIKVKWA 395>XP_005269994 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 HLIRVKFA 9 H+I+VK+A Sbjct: 388 HVIKVKWA 395>NP_001265853 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLIRVK 7 HL+RVK Sbjct: 193 HLLRVK 198>NP_001244073 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>NP_001244074 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 122 QHRVQLKYA 130>NP_001121646 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLIRVKFA 9 HL+ VK+A Sbjct: 149 HLLGVKYA 156>NP_689651 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>NP_085911 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>NP_004390 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>XP_006719115 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_005253390 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719114 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719113 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719112 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 122 QHRVQLKYA 130>XP_006719111 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 122 QHRVQLKYA 130>XP_006719110 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>XP_006719109 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>XP_006719108 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>XP_006719107 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 148 QHRVQLKYA 156>XP_005253388 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719106 Length = 1018 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719105 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006719104 Length = 1031 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 QHLIRVKFA 9 QH +++K+A Sbjct: 184 QHRVQLKYA 192>XP_006714366 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLIRVKFA 9 HL+ VK+A Sbjct: 149 HLLGVKYA 156>XP_006714365 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLIRVKFA 9 HL+ VK+A Sbjct: 149 HLLGVKYA 156>NP_003351 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HLIRVKFA 9 HL+ VK+A Sbjct: 149 HLLGVKYA 156Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.148 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,822 Number of extensions: 873 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |