Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001268421                                                           19     665
NP_000170                                                              19     665
XP_005264328                                                           19     665
NP_689929                                                              19     869
XP_005273892                                                           19     869
XP_005273891                                                           19     869
XP_005273890                                                           19     869
NP_037491                                                              18    1482
NP_005848                                                              18    1482
XP_005259263                                                           18    1482
NP_001271221                                                           18    1935
NP_001271222                                                           18    1935
NP_786883                                                              18    1935
NP_443179                                                              17    3301
NP_068777                                                              17    3301
XP_005276055                                                           17    3301
NP_938009                                                              17    4312
NP_699171                                                              17    4312
NP_689909                                                              17    4312
XP_005270670                                                           17    4312
XP_005270669                                                           17    4312
XP_006710506                                                           17    4312
XP_005270668                                                           17    4312
XP_005270667                                                           17    4312
XP_005270666                                                           17    4312
XP_005270503                                                           17    4312
XP_005270502                                                           17    4312
NP_002007                                                              16    5631
NP_055453                                                              16    5631
NP_060583                                                              16    5631
NP_001071062                                                           16    5631
NP_055446                                                              16    5631
NP_795352                                                              16    5631
NP_005119                                                              16    5631
XP_006725013                                                           16    5631
XP_006725012                                                           16    5631
XP_006724131                                                           16    5631
XP_006720367                                                           16    5631
XP_006719565                                                           16    5631
XP_006719564                                                           16    5631
XP_005269079                                                           16    5631
XP_005270355                                                           16    5631
XP_006718143                                                           16    5631
XP_005270354                                                           16    5631
XP_005270352                                                           16    5631
XP_005270351                                                           16    5631
XP_006718142                                                           16    5631
XP_006711117                                                           16    5631
XP_006710340                                                           16    5631
XP_005270398                                                           16    5631
XP_006710339                                                           16    5631
XP_006710338                                                           16    5631
NP_612404                                                              16    5631
NP_006758                                                              16    7355
NP_001130038                                                           16    7355
NP_001265373                                                           16    7355
NP_036211                                                              16    7355
NP_005095                                                              16    7355
NP_997253                                                              16    7355
NP_061874                                                              16    7355
NP_001269786                                                           16    7355
NP_001186384                                                           16    7355
NP_001106653                                                           16    7355
NP_006505                                                              16    7355
NP_835260                                                              16    7355
NP_001186385                                                           16    7355
XP_006723668                                                           16    7355
XP_006723667                                                           16    7355
XP_006723666                                                           16    7355
XP_006723665                                                           16    7355
XP_005248329                                                           16    7355
XP_005248328                                                           16    7355
XP_006714522                                                           16    7355
XP_005248327                                                           16    7355
XP_005248326                                                           16    7355
XP_006714519                                                           16    7355
XP_005247601                                                           16    7355
XP_006713735                                                           16    7355
XP_006713734                                                           16    7355
XP_005265428                                                           16    7355
NP_114171                                                              16    7355
NP_061324                                                              16    7355
NP_001035943                                                           16    7355
NP_064516                                                              15    9605
NP_443728                                                              15    9605
NP_001254772                                                           15    9605
NP_004889                                                              15    9605
NP_001167541                                                           15    9605
NP_001013644                                                           15    9605
NP_714918                                                              15    9605
NP_001273978                                                           15    9605
NP_001139129                                                           15    9605
NP_001271268                                                           15    9605
NP_940682                                                              15    9605
NP_001271267                                                           15    9605
NP_001271269                                                           15    9605
NP_733749                                                              15    9605
NP_055772                                                              15    9605
NP_001139679                                                           15    9605
NP_001139678                                                           15    9605
NP_001139677                                                           15    9605
NP_001139676                                                           15    9605
NP_001139675                                                           15    9605
NP_001139130                                                           15    9605
NP_060482                                                              15    9605
NP_002876                                                              15    9605
XP_005250902                                                           15    9605
XP_005250901                                                           15    9605
XP_005250900                                                           15    9605
XP_005250899                                                           15    9605
XP_005250898                                                           15    9605
XP_005250897                                                           15    9605
XP_005250896                                                           15    9605
XP_005250895                                                           15    9605
XP_005265906                                                           15    9605
XP_006714896                                                           15    9605
XP_006714117                                                           15    9605
XP_005265844                                                           15    9605
XP_005248005                                                           15    9605
XP_006713550                                                           15    9605
XP_005245405                                                           15    9605
XP_005245404                                                           15    9605
XP_006710870                                                           15    9605
XP_005246013                                                           15    9605
XP_006710869                                                           15    9605
XP_005246012                                                           15    9605
XP_005246011                                                           15    9605
XP_006710868                                                           15    9605
XP_006710867                                                           15    9605
NP_001139674                                                           15    9605
NP_056471                                                              15    9605
NP_079429                                                              15    9605
>NP_001268421
          Length = 1230

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           QGSRRSS Q
Sbjct: 106 QGSRRSSRQ 114
>NP_000170
          Length = 1360

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           QGSRRSS Q
Sbjct: 236 QGSRRSSRQ 244
>XP_005264328
          Length = 1261

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           QGSRRSS Q
Sbjct: 137 QGSRRSSRQ 145
>NP_689929
          Length = 770

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS RSSHQ
Sbjct: 385 RGSHRSSHQ 393
>XP_005273892
          Length = 551

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS RSSHQ
Sbjct: 166 RGSHRSSHQ 174
>XP_005273891
          Length = 740

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS RSSHQ
Sbjct: 355 RGSHRSSHQ 363
>XP_005273890
          Length = 770

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS RSSHQ
Sbjct: 385 RGSHRSSHQ 393
>NP_037491
          Length = 617

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3   SRRSSHQ 9
           SRRSSHQ
Sbjct: 435 SRRSSHQ 441
>NP_005848
          Length = 475

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   QGSRRSSH 8
           +GS+RSSH
Sbjct: 256 EGSKRSSH 263
>XP_005259263
          Length = 617

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 3   SRRSSHQ 9
           SRRSSHQ
Sbjct: 435 SRRSSHQ 441
>NP_001271221
          Length = 1160

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS+R+SH
Sbjct: 1074 QGSQRASH 1081
>NP_001271222
          Length = 1150

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS+R+SH
Sbjct: 1064 QGSQRASH 1071
>NP_786883
          Length = 1132

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS+R+SH
Sbjct: 1046 QGSQRASH 1053
>NP_443179
          Length = 2170

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QG  R SHQ
Sbjct: 466 QGETRDSHQ 474
>NP_068777
          Length = 488

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           +GS RS HQ
Sbjct: 395 EGSERSLHQ 403
>XP_005276055
          Length = 240

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  GSRRSSH 8
          G RRSSH
Sbjct: 18 GQRRSSH 24
>NP_938009
          Length = 1210

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  QGSRRSSHQ 9
          QG   SSHQ
Sbjct: 53 QGQANSSHQ 61
>NP_699171
          Length = 722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QGSR   HQ
Sbjct: 151 QGSRSRGHQ 159
>NP_689909
          Length = 1075

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  QGSRRSSHQ 9
          QG   SSHQ
Sbjct: 53 QGQANSSHQ 61
>XP_005270670
          Length = 1210

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  QGSRRSSHQ 9
          QG   SSHQ
Sbjct: 53 QGQANSSHQ 61
>XP_005270669
          Length = 1210

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  QGSRRSSHQ 9
          QG   SSHQ
Sbjct: 53 QGQANSSHQ 61
>XP_006710506
          Length = 1247

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QG   SSHQ
Sbjct: 124 QGQANSSHQ 132
>XP_005270668
          Length = 1256

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QG   SSHQ
Sbjct: 124 QGQANSSHQ 132
>XP_005270667
          Length = 1280

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QG   SSHQ
Sbjct: 124 QGQANSSHQ 132
>XP_005270666
          Length = 1281

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QG   SSHQ
Sbjct: 124 QGQANSSHQ 132
>XP_005270503
          Length = 754

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QGSR   HQ
Sbjct: 151 QGSRSRGHQ 159
>XP_005270502
          Length = 763

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   QGSRRSSHQ 9
           QGSR   HQ
Sbjct: 151 QGSRSRGHQ 159
>NP_002007
          Length = 4061

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    GSRRSSHQ 9
            GSR S HQ
Sbjct: 1259 GSRTSRHQ 1266

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    QGSRRSSHQ 9
            +G R+ SHQ
Sbjct: 2146 RGGRQGSHQ 2154

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    QGSRRSSHQ 9
            +GSRRS  Q
Sbjct: 2879 EGSRRSRRQ 2887

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    QGSRRSSHQ 9
            +GSRRS  Q
Sbjct: 3203 EGSRRSRRQ 3211
>NP_055453
          Length = 1416

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    GSRRSSH 8
            GSRR SH
Sbjct: 1272 GSRRLSH 1278
>NP_060583
          Length = 489

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           Q SR++ HQ
Sbjct: 481 QASRKTQHQ 489
>NP_001071062
          Length = 722

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  QGSRRSS 7
          QGSRR+S
Sbjct: 27 QGSRRTS 33
>NP_055446
          Length = 1105

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 785 EGSRRSS 791
>NP_795352
          Length = 1801

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS++S+H
Sbjct: 1630 QGSQQSAH 1637
>NP_005119
          Length = 2298

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           QGSR +SH
Sbjct: 946 QGSRVTSH 953
>XP_006725013
          Length = 1389

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    GSRRSSH 8
            GSRR SH
Sbjct: 1245 GSRRLSH 1251
>XP_006725012
          Length = 1388

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    GSRRSSH 8
            GSRR SH
Sbjct: 1244 GSRRLSH 1250
>XP_006724131
          Length = 2298

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           QGSR +SH
Sbjct: 946 QGSRVTSH 953
>XP_006720367
          Length = 769

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  QGSRRSS 7
          QGSRR+S
Sbjct: 27 QGSRRTS 33
>XP_006719565
          Length = 356

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           Q SR++ HQ
Sbjct: 348 QASRKTQHQ 356
>XP_006719564
          Length = 450

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           Q SR++ HQ
Sbjct: 442 QASRKTQHQ 450
>XP_005269079
          Length = 469

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           Q SR++ HQ
Sbjct: 461 QASRKTQHQ 469
>XP_005270355
          Length = 968

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 648 EGSRRSS 654
>XP_006718143
          Length = 999

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 679 EGSRRSS 685
>XP_005270354
          Length = 1014

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 694 EGSRRSS 700
>XP_005270352
          Length = 1118

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 798 EGSRRSS 804
>XP_005270351
          Length = 1133

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 813 EGSRRSS 819
>XP_006718142
          Length = 1164

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   QGSRRSS 7
           +GSRRSS
Sbjct: 844 EGSRRSS 850
>XP_006711117
          Length = 1413

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2    GSRRSSH 8
            GSRR SH
Sbjct: 1269 GSRRLSH 1275
>XP_006710340
          Length = 1815

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS++S+H
Sbjct: 1644 QGSQQSAH 1651
>XP_005270398
          Length = 1882

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS++S+H
Sbjct: 1630 QGSQQSAH 1637
>XP_006710339
          Length = 1896

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS++S+H
Sbjct: 1644 QGSQQSAH 1651
>XP_006710338
          Length = 1896

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    QGSRRSSH 8
            QGS++S+H
Sbjct: 1644 QGSQQSAH 1651
>NP_612404
          Length = 593

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   SRRSSH 8
           SRRSSH
Sbjct: 256 SRRSSH 261
>NP_006758
          Length = 840

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GSRRSSH 8
          G+RRS H
Sbjct: 65 GARRSKH 71
>NP_001130038
          Length = 556

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GSRRSSHQ 9
           GS+ SSH+
Sbjct: 420 GSQHSSHE 427
>NP_001265373
          Length = 651

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   QGSRRS 6
           QGSRRS
Sbjct: 540 QGSRRS 545
>NP_036211
          Length = 488

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  GSRRSSH 8
          GSR SSH
Sbjct: 13 GSRPSSH 19
>NP_005095
          Length = 801

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           QGS  S+HQ
Sbjct: 206 QGSVTSAHQ 214
>NP_997253
          Length = 609

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   QGSRRSS 7
           QG RRSS
Sbjct: 223 QGKRRSS 229
>NP_061874
          Length = 1706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GSRR+ H
Sbjct: 939 RGSRRNPH 946
>NP_001269786
          Length = 1694

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GSRR+ H
Sbjct: 939 RGSRRNPH 946
>NP_001186384
          Length = 836

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           QGS  S+HQ
Sbjct: 206 QGSVTSAHQ 214
>NP_001106653
          Length = 801

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           QGS  S+HQ
Sbjct: 206 QGSVTSAHQ 214
>NP_006505
          Length = 1956

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GSRRSSH 8
           G RR+SH
Sbjct: 495 GKRRASH 501
>NP_835260
          Length = 2839

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 352 RGSKRSPH 359
>NP_001186385
          Length = 754

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           QGS  S+HQ
Sbjct: 159 QGSVTSAHQ 167
>XP_006723668
          Length = 556

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GSRRSSHQ 9
           GS+ SSH+
Sbjct: 420 GSQHSSHE 427
>XP_006723667
          Length = 563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GSRRSSHQ 9
           GS+ SSH+
Sbjct: 428 GSQHSSHE 435
>XP_006723666
          Length = 564

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GSRRSSHQ 9
           GS+ SSH+
Sbjct: 428 GSQHSSHE 435
>XP_006723665
          Length = 564

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GSRRSSHQ 9
           GS+ SSH+
Sbjct: 428 GSQHSSHE 435
>XP_005248329
          Length = 2699

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 178 RGSKRSPH 185
>XP_005248328
          Length = 2699

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 178 RGSKRSPH 185
>XP_006714522
          Length = 2719

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 352 RGSKRSPH 359
>XP_005248327
          Length = 2839

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 352 RGSKRSPH 359
>XP_005248326
          Length = 2873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 352 RGSKRSPH 359
>XP_006714519
          Length = 2873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GS+RS H
Sbjct: 352 RGSKRSPH 359
>XP_005247601
          Length = 1484

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GSRR+ H
Sbjct: 729 RGSRRNPH 736
>XP_006713735
          Length = 1656

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GSRR+ H
Sbjct: 939 RGSRRNPH 946
>XP_006713734
          Length = 1693

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           +GSRR+ H
Sbjct: 939 RGSRRNPH 946
>XP_005265428
          Length = 1959

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GSRRSSH 8
           G RR+SH
Sbjct: 498 GKRRASH 504
>NP_114171
          Length = 798

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   QGSRRSSHQ 9
           + SR+S HQ
Sbjct: 335 RSSRKSKHQ 343
>NP_061324
          Length = 411

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   SRRSSHQ 9
           +RR+SHQ
Sbjct: 313 TRRNSHQ 319
>NP_001035943
          Length = 411

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   SRRSSHQ 9
           +RR+SHQ
Sbjct: 313 TRRNSHQ 319
>NP_064516
          Length = 601

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 134 GSRRSS 139
>NP_443728
          Length = 2145

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GSRRSSHQ 9
            GS+R +HQ
Sbjct: 2009 GSQRLNHQ 2016
>NP_001254772
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 435 RSSRKSSH 442
>NP_004889
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 435 RSSRKSSH 442
>NP_001167541
          Length = 398

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 363 GSRRSS 368
>NP_001013644
          Length = 398

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 363 GSRRSS 368
>NP_714918
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   GSRRSSH 8
           GS++SSH
Sbjct: 450 GSQQSSH 456
>NP_001273978
          Length = 409

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   GSRRSSH 8
           GS++SSH
Sbjct: 385 GSQQSSH 391
>NP_001139129
          Length = 681

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 520 GSRRSS 525
>NP_001271268
          Length = 1303

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS ++SHQ
Sbjct: 290 KGSYQTSHQ 298
>NP_940682
          Length = 1247

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS ++SHQ
Sbjct: 290 KGSYQTSHQ 298
>NP_001271267
          Length = 1319

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS ++SHQ
Sbjct: 290 KGSYQTSHQ 298
>NP_001271269
          Length = 1302

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   QGSRRSSHQ 9
           +GS ++SHQ
Sbjct: 290 KGSYQTSHQ 298
>NP_733749
          Length = 673

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_055772
          Length = 1198

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 454 RASRKSSH 461
>NP_001139679
          Length = 576

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_001139678
          Length = 484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_001139677
          Length = 639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_001139676
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_001139675
          Length = 581

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_001139130
          Length = 727

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 558 GSRRSS 563
>NP_060482
          Length = 2108

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    GSRRSS 7
            GSRRSS
Sbjct: 1272 GSRRSS 1277
>NP_002876
          Length = 663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 494 GSRRSS 499
>XP_005250902
          Length = 808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  QGSRRSSH 8
          + SR+SSH
Sbjct: 46 RASRKSSH 53
>XP_005250901
          Length = 900

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 138 RASRKSSH 145
>XP_005250900
          Length = 1048

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 286 RASRKSSH 293
>XP_005250899
          Length = 1218

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 456 RASRKSSH 463
>XP_005250898
          Length = 1226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 482 RASRKSSH 489
>XP_005250897
          Length = 1244

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 482 RASRKSSH 489
>XP_005250896
          Length = 1278

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 534 RASRKSSH 541
>XP_005250895
          Length = 1296

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 534 RASRKSSH 541
>XP_005265906
          Length = 1421

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SRRSSHQ 9
            S+RSSH+
Sbjct: 1407 SKRSSHR 1413
>XP_006714896
          Length = 1461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SRRSSHQ 9
            S+RSSH+
Sbjct: 1447 SKRSSHR 1453
>XP_006714117
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 435 RSSRKSSH 442
>XP_005265844
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + SR+SSH
Sbjct: 435 RSSRKSSH 442
>XP_005248005
          Length = 398

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 363 GSRRSS 368
>XP_006713550
          Length = 2180

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GSRRSSHQ 9
            GS+R +HQ
Sbjct: 2044 GSQRLNHQ 2051
>XP_005245405
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 134 GSRRSS 139
>XP_005245404
          Length = 565

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 134 GSRRSS 139
>XP_006710870
          Length = 779

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 610 GSRRSS 615
>XP_005246013
          Length = 800

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 631 GSRRSS 636
>XP_006710869
          Length = 812

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 643 GSRRSS 648
>XP_005246012
          Length = 818

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 657 GSRRSS 662
>XP_005246011
          Length = 826

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 657 GSRRSS 662
>XP_006710868
          Length = 877

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 716 GSRRSS 721
>XP_006710867
          Length = 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GSRRSS 7
           GSRRSS
Sbjct: 716 GSRRSS 721
>NP_001139674
          Length = 659

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  SRRSSHQ 9
          S+R SHQ
Sbjct: 6  SKRKSHQ 12
>NP_056471
          Length = 1882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   QGSRRSSH 8
           + +RRSSH
Sbjct: 596 EDARRSSH 603
>NP_079429
          Length = 1461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    SRRSSHQ 9
            S+RSSH+
Sbjct: 1447 SKRSSHR 1453
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.304    0.109    0.292 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 655,414
Number of extensions: 2185
Number of successful extensions: 135
Number of sequences better than 10000.0: 132
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 135
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package