Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_001092882 19 665 NP_006757 19 665 NP_001092883 19 665 XP_005273706 19 665 NP_004320 17 2528 NP_937762 16 5631 NP_006535 16 5631 NP_001121190 16 5631 NP_000218 16 5631 NP_001121189 16 5631 NP_036533 16 5631 XP_005261968 16 5631 XP_005261966 16 5631 XP_005261967 16 5631 XP_006724476 16 5631 XP_005261965 16 5631 XP_005267329 16 5631 NP_001238892 16 7355 NP_115575 16 7355 NP_001238891 16 7355 NP_056410 16 7355 NP_055396 16 7355 NP_001275916 16 7355 NP_001074012 16 7355 NP_067054 16 7355 XP_005247381 16 7355 XP_006725061 16 7355 XP_006717149 16 7355 NP_055730 15 9605 NP_001242982 15 9605 NP_001137378 15 9605 NP_006691 15 9605 NP_001073867 15 9605 NP_476500 15 9605 NP_001392 15 9605 NP_113584 15 9605 NP_001012746 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_006717494 15 9605 XP_006717493 15 9605 XP_006717492 15 9605 XP_006717491 15 9605 XP_006717490 15 9605 XP_006717489 15 9605 XP_006717488 15 9605 XP_006717487 15 9605 XP_006717486 15 9605 XP_005251911 15 9605 XP_005251910 15 9605 XP_005251909 15 9605 XP_005251908 15 9605 XP_005251907 15 9605 XP_005251839 15 9605 XP_005251838 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QGRNAD ML Sbjct: 278 QGRNADNML 286>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QGRNAD ML Sbjct: 278 QGRNADNML 286>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QGRNAD ML Sbjct: 278 QGRNADNML 286>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QGRNAD ML Sbjct: 278 QGRNADNML 286>NP_001092882 Length = 2004 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QG+NAD ML Sbjct: 271 QGKNADNML 279>NP_006757 Length = 2004 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QG+NAD ML Sbjct: 271 QGKNADNML 279>NP_001092883 Length = 2004 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QG+NAD ML Sbjct: 271 QGKNADNML 279>XP_005273706 Length = 1997 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QG+NAD ML Sbjct: 271 QGKNADNML 279>NP_004320 Length = 532 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QGRNADTML 9 QG+N D+ML Sbjct: 22 QGQNLDSML 30>NP_937762 Length = 3333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GRNADTML 9 GRN++T+L Sbjct: 2522 GRNSNTLL 2529>NP_006535 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N DT+L Sbjct: 596 GKNVDTVL 603>NP_001121190 Length = 1668 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GRNADTML 9 GRN++T+L Sbjct: 857 GRNSNTLL 864>NP_000218 Length = 1724 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GRNADTML 9 GRN++T+L Sbjct: 913 GRNSNTLL 920>NP_001121189 Length = 3277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GRNADTML 9 GRN++T+L Sbjct: 2466 GRNSNTLL 2473>NP_036533 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261968 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261966 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261967 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_006724476 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 688 QGKNLDTV 695>XP_005261965 Length = 1920 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QGRNADTM 8 QG+N DT+ Sbjct: 770 QGKNLDTV 777>XP_005267329 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N DT+L Sbjct: 634 GKNVDTVL 641>NP_001238892 Length = 791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N+ TML Sbjct: 727 GKNSSTML 734>NP_115575 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QGRNAD 6 QGRN+D Sbjct: 84 QGRNSD 89>NP_001238891 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N+ TML Sbjct: 727 GKNSSTML 734>NP_056410 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N+ TML Sbjct: 727 GKNSSTML 734>NP_055396 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GRNADT 7 GRN+DT Sbjct: 130 GRNSDT 135>NP_001275916 Length = 170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GRNADT 7 GRN+DT Sbjct: 130 GRNSDT 135>NP_001074012 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QGRNAD 6 QG+NAD Sbjct: 356 QGKNAD 361>NP_067054 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QGRNAD 6 QG+NAD Sbjct: 356 QGKNAD 361>XP_005247381 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N+ TML Sbjct: 232 GKNSSTML 239>XP_006725061 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRNADTML 9 G+N+ TML Sbjct: 760 GKNSSTML 767>XP_006717149 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GRNADT 7 GRN+DT Sbjct: 97 GRNSDT 102>NP_055730 Length = 1710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 803 RNADTL 808>NP_001242982 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 802 RNADTL 807>NP_001137378 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QGRNADT 7 QGRN D+ Sbjct: 495 QGRNRDS 501>NP_006691 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 QGRNADT 7 QGRN D+ Sbjct: 495 QGRNRDS 501>NP_001073867 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 951 RNADTL 956>NP_476500 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNADTML 9 RN DTM+ Sbjct: 248 RNRDTMM 254>NP_001392 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNADTML 9 RN DTM+ Sbjct: 248 RNRDTMM 254>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3166 GSNVDTLL 3173>NP_001012746 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 102 RNADTL 107>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3032 GSNVDTLL 3039>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3133 GSNVDTLL 3140>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3166 GSNVDTLL 3173>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3157 GSNVDTLL 3164>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3165 GSNVDTLL 3172>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3166 GSNVDTLL 3173>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3166 GSNVDTLL 3173>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRNADTML 9 G N DT+L Sbjct: 3166 GSNVDTLL 3173>XP_006717494 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 664 RNADTL 669>XP_006717493 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 703 RNADTL 708>XP_006717492 Length = 1635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717491 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 770 RNADTL 775>XP_006717490 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 884 RNADTL 889>XP_006717489 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717488 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 1165 RNADTL 1170>XP_006717487 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 1164 RNADTL 1169>XP_006717486 Length = 2072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 1165 RNADTL 1170>XP_005251911 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 773 RNADTL 778>XP_005251910 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 773 RNADTL 778>XP_005251909 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 773 RNADTL 778>XP_005251908 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 773 RNADTL 778>XP_005251907 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RNADTM 8 RNADT+ Sbjct: 779 RNADTL 784>XP_005251839 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNADTML 9 RN DTM+ Sbjct: 248 RNRDTMM 254>XP_005251838 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RNADTML 9 RN DTM+ Sbjct: 248 RNRDTMM 254Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 559,219 Number of extensions: 752 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |