Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 NP_653080 20 390 XP_005267292 20 390 XP_005267291 20 390 XP_005267290 20 390 NP_005821 17 2528 NP_000101 17 3301 NP_056070 17 3301 NP_001186064 17 3301 NP_004171 17 3301 NP_065811 17 3301 XP_005249023 17 3301 XP_005249022 17 3301 XP_006712712 17 3301 XP_006712711 17 3301 XP_006712710 17 3301 XP_006712709 17 3301 XP_005246268 17 3301 XP_005246267 17 3301 XP_005246265 17 3301 XP_005246264 17 3301 XP_005246263 17 3301 XP_006710460 17 3301 XP_005270619 17 3301 NP_689953 17 4312 NP_775487 16 5631 XP_006715416 16 5631 XP_006715415 16 5631 XP_005266895 16 5631 NP_001230925 16 7355 NP_001073950 16 7355 NP_001027 16 7355 XP_005267232 16 7355 XP_005267230 16 7355 XP_005267229 16 7355 XP_005267228 16 7355 XP_005267227 16 7355 XP_005267226 16 7355 NP_783864 15 9605 NP_060105 15 9605 XP_005274094 15 9605 XP_006718644 15 9605 XP_005274093 15 9605 XP_005274092 15 9605 XP_005262701 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 QFVRTEET Sbjct: 1560 QFVRTEET 1567>NP_653080 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 QFVRTEET Sbjct: 1462 QFVRTEET 1469>XP_005267292 Length = 1677 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 QFVRTEET Sbjct: 1455 QFVRTEET 1462>XP_005267291 Length = 1684 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 QFVRTEET Sbjct: 1462 QFVRTEET 1469>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 QFVRTEET Sbjct: 1560 QFVRTEET 1567>NP_005821 Length = 395 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QFVRTEETT 9 Q VRTEET+ Sbjct: 73 QSVRTEETS 81>NP_000101 Length = 1025 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QFVRTEE 7 QFVRTE+ Sbjct: 407 QFVRTEQ 413>NP_056070 Length = 1755 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFVRTEETT 9 QF+R EE+T Sbjct: 1258 QFLRKEEST 1266>NP_001186064 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 280 FVKTEET 286>NP_004171 Length = 425 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 280 FVKTEET 286>NP_065811 Length = 1572 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+RTE T Sbjct: 1116 QFIRTEGT 1123>XP_005249023 Length = 1052 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFVRTEETT 9 QF+R EE+T Sbjct: 555 QFLRKEEST 563>XP_005249022 Length = 1755 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFVRTEETT 9 QF+R EE+T Sbjct: 1258 QFLRKEEST 1266>XP_006712712 Length = 1414 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+RTE T Sbjct: 958 QFIRTEGT 965>XP_006712711 Length = 1448 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+RTE T Sbjct: 992 QFIRTEGT 999>XP_006712710 Length = 1528 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+RTE T Sbjct: 1123 QFIRTEGT 1130>XP_006712709 Length = 1579 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+RTE T Sbjct: 1123 QFIRTEGT 1130>XP_005246268 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 281 FVKTEET 287>XP_005246267 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 281 FVKTEET 287>XP_005246265 Length = 484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 339 FVKTEET 345>XP_005246264 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 387 FVKTEET 393>XP_005246263 Length = 533 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVRTEET 8 FV+TEET Sbjct: 388 FVKTEET 394>XP_006710460 Length = 889 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QFVRTEE 7 QFVRTE+ Sbjct: 407 QFVRTEQ 413>XP_005270619 Length = 953 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QFVRTEE 7 QFVRTE+ Sbjct: 407 QFVRTEQ 413>NP_689953 Length = 336 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 QF+R EET Sbjct: 328 QFLREEET 335>NP_775487 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFVRTEET 8 Q VRT+ET Sbjct: 105 QVVRTQET 112>XP_006715416 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 +FV++EET Sbjct: 479 EFVKSEET 486>XP_006715415 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 +FV++EET Sbjct: 479 EFVKSEET 486>XP_005266895 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QFVRTEET 8 +FV++EET Sbjct: 479 EFVKSEET 486>NP_001230925 Length = 4865 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QFVRTEE 7 QF+RTE+ Sbjct: 13 QFLRTED 19>NP_001073950 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 305 VRTEET 310>NP_001027 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QFVRTEE 7 QF+RTE+ Sbjct: 13 QFLRTED 19>XP_005267232 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 305 VRTEET 310>XP_005267230 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 140 VRTEET 145>XP_005267229 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 305 VRTEET 310>XP_005267228 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 304 VRTEET 309>XP_005267227 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 305 VRTEET 310>XP_005267226 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRTEET 8 VRTEET Sbjct: 305 VRTEET 310>NP_783864 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRTEETT 9 V+TE+TT Sbjct: 425 VKTEDTT 431>NP_060105 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QFVRTEETT 9 QF + EE+T Sbjct: 622 QFAKIEEST 630>XP_005274094 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QFVRTEETT 9 QF + EE+T Sbjct: 450 QFAKIEEST 458>XP_006718644 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QFVRTEETT 9 QF + EE+T Sbjct: 599 QFAKIEEST 607>XP_005274093 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QFVRTEETT 9 QF + EE+T Sbjct: 599 QFAKIEEST 607>XP_005274092 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QFVRTEETT 9 QF + EE+T Sbjct: 622 QFAKIEEST 630>XP_005262701 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRTEETT 9 V+TE+TT Sbjct: 425 VKTEDTT 431Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.119 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,174 Number of extensions: 596 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |