Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_689763 17 4312 NP_071371 17 4312 NP_060667 17 4312 NP_955458 17 4312 XP_006723884 17 4312 XP_006714821 17 4312 XP_006714820 17 4312 XP_005268437 17 4312 NP_955459 17 4312 NP_060140 16 5631 NP_001177943 16 5631 NP_899062 16 5631 NP_001165906 16 5631 NP_036365 16 5631 XP_006717687 16 5631 XP_006717686 16 5631 NP_689849 16 7355 NP_001107000 16 7355 XP_006718229 16 7355 XP_006718227 16 7355 XP_006718226 16 7355 XP_005252866 16 7355 XP_006718225 16 7355 NP_001460 15 9605 NP_001275906 15 9605 NP_001275905 15 9605 NP_001275907 15 9605 NP_001129477 15 9605 NP_001129478 15 9605 NP_000810 15 9605 NP_001245366 15 9605 NP_689508 15 9605 NP_001245367 15 9605 NP_001073888 15 9605 XP_006724053 15 9605 XP_006724052 15 9605 XP_005260998 15 9605 XP_006724051 15 9605 XP_006722211 15 9605 XP_006722210 15 9605 XP_006722209 15 9605 XP_006722208 15 9605 XP_006722207 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QFSNLEALI 9 QFSNLEAL+ Sbjct: 117 QFSNLEALL 125>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QFSNLEALI 9 QFSNLEAL+ Sbjct: 183 QFSNLEALL 191>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QFSNLEALI 9 QFSNLEAL+ Sbjct: 183 QFSNLEALL 191>NP_689763 Length = 729 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FSN+EAL Sbjct: 57 FSNIEAL 63>NP_071371 Length = 627 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 QF+NL+A + Sbjct: 39 QFNNLDAFV 47>NP_060667 Length = 681 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 QF+NL+A + Sbjct: 39 QFNNLDAFV 47>NP_955458 Length = 679 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 QF+NL+A + Sbjct: 37 QFNNLDAFV 45>XP_006723884 Length = 625 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 QF+NL+A + Sbjct: 37 QFNNLDAFV 45>XP_006714821 Length = 577 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FSN+EAL Sbjct: 57 FSNIEAL 63>XP_006714820 Length = 729 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FSN+EAL Sbjct: 57 FSNIEAL 63>XP_005268437 Length = 735 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FSN+EAL Sbjct: 57 FSNIEAL 63>NP_955459 Length = 645 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 QF+NL+A + Sbjct: 39 QFNNLDAFV 47>NP_060140 Length = 271 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FSNLEALI 9 FS+LEAL+ Sbjct: 98 FSHLEALL 105>NP_001177943 Length = 215 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 +FSNLE ++ Sbjct: 122 EFSNLEEIL 130>NP_899062 Length = 243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 +FSNLE ++ Sbjct: 150 EFSNLEEIL 158>NP_001165906 Length = 988 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 Q +N+EALI Sbjct: 835 QITNVEALI 843>NP_036365 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 Q +N+EALI Sbjct: 835 QITNVEALI 843>XP_006717687 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QFSNLEAL 8 +FSNLE L Sbjct: 150 EFSNLEEL 157>XP_006717686 Length = 243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QFSNLEALI 9 +FSNLE ++ Sbjct: 150 EFSNLEEIL 158>NP_689849 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>NP_001107000 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>XP_006718229 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>XP_006718227 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>XP_006718226 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>XP_005252866 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>XP_006718225 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFSNLEALI 9 QFS EAL+ Sbjct: 145 QFSQAEALL 153>NP_001460 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FSNLEAL 8 F NLEAL Sbjct: 487 FRNLEAL 493>NP_001275906 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FSNLEAL 8 F NLEAL Sbjct: 446 FRNLEAL 452>NP_001275905 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FSNLEAL 8 F NLEAL Sbjct: 487 FRNLEAL 493>NP_001275907 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FSNLEAL 8 F NLEAL Sbjct: 437 FRNLEAL 443>NP_001129477 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>NP_001129478 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>NP_000810 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>NP_001245366 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 199 FSSLEAL 205>NP_689508 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 199 FSSLEAL 205>NP_001245367 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 232 FSSLEAL 238>NP_001073888 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 732 FSDLEAL 738>XP_006724053 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>XP_006724052 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>XP_005260998 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 819 SNLQALI 825>XP_006724051 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLEALI 9 SNL+ALI Sbjct: 835 SNLQALI 841>XP_006722211 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 564 FSDLEAL 570>XP_006722210 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 564 FSDLEAL 570>XP_006722209 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 748 FSDLEAL 754>XP_006722208 Length = 827 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 749 FSDLEAL 755>XP_006722207 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FSNLEAL 8 FS+LEAL Sbjct: 761 FSDLEAL 767Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.136 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,936 Number of extensions: 489 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |