Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 869 NP_002935 17 3301 XP_006715611 17 3301 NP_848612 16 7355 XP_006725381 16 7355 XP_006725380 16 7355 XP_005257295 16 7355 XP_006721894 16 7355 XP_005251848 16 7355 XP_005251847 16 7355 XP_005251846 16 7355 NP_001926 15 9605 NP_056011 15 9605 NP_001124479 15 9605 NP_001129157 15 9605 NP_996844 15 9605 XP_005254439 15 9605 XP_006720568 15 9605 XP_005254438 15 9605 XP_005262928 15 9605 XP_005262927 15 9605 XP_005262926 15 9605 XP_005246428 15 9605 NP_002335 15 9605>NP_004295 Length = 1620 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QFILLELMA 9 +FILLELMA Sbjct: 1192 RFILLELMA 1200>NP_002935 Length = 2347 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QFILLELM 8 Q+I+LELM Sbjct: 2022 QYIILELM 2029>XP_006715611 Length = 2342 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QFILLELM 8 Q+I+LELM Sbjct: 2017 QYIILELM 2024>NP_848612 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FILLELM 8 FILLEL+ Sbjct: 78 FILLELL 84>XP_006725381 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FILLELM 8 FILLEL+ Sbjct: 78 FILLELL 84>XP_006725380 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FILLELM 8 FILLEL+ Sbjct: 78 FILLELL 84>XP_005257295 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FILLELM 8 FILLEL+ Sbjct: 78 FILLELL 84>XP_006721894 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FILLELM 8 FILLEL+ Sbjct: 78 FILLELL 84>XP_005251848 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFILLELMA 9 QF+ LEL A Sbjct: 53 QFLYLELQA 61>XP_005251847 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFILLELMA 9 QF+ LEL A Sbjct: 53 QFLYLELQA 61>XP_005251846 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QFILLELMA 9 QF+ LEL A Sbjct: 53 QFLYLELQA 61>NP_001926 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QFILLE 6 QFILLE Sbjct: 112 QFILLE 117>NP_056011 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QFILLELM 8 Q+IL+E M Sbjct: 894 QYILMEFM 901>NP_001124479 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QFILLELM 8 Q+IL+E M Sbjct: 895 QYILMEFM 902>NP_001129157 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 456 RLILLELMS 464>NP_996844 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 525 RLILLELMS 533>XP_005254439 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 197 RLILLELMS 205>XP_006720568 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 493 RLILLELMS 501>XP_005254438 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 541 RLILLELMS 549>XP_005262928 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QFILLELM 8 Q+IL+E M Sbjct: 250 QYILMEFM 257>XP_005262927 Length = 1526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QFILLELM 8 Q+IL+E M Sbjct: 811 QYILMEFM 818>XP_005262926 Length = 1609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QFILLELM 8 Q+IL+E M Sbjct: 895 QYILMEFM 902>XP_005246428 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QFILLE 6 QFILLE Sbjct: 111 QFILLE 116>NP_002335 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QFILLELMA 9 + ILLELM+ Sbjct: 586 RLILLELMS 594Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.156 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 356,157 Number of extensions: 407 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |