Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001073904 16 5631 NP_005245 16 5631 NP_852092 16 5631 NP_002032 16 5631 NP_001607 16 5631 NP_057739 16 5631 NP_057738 16 5631 NP_001265509 16 5631 NP_001265508 16 5631 XP_006720521 16 5631 XP_006720520 16 5631 XP_005254331 16 5631 XP_005254330 16 5631 XP_006720519 16 5631 XP_006720518 16 5631 XP_005272481 16 5631 XP_005272478 16 5631 NP_996816 16 7355 NP_065928 16 7355 XP_005256527 16 7355 NP_653219 15 9605 NP_001273429 15 9605 NP_001018170 15 9605 NP_001018169 15 9605 NP_003896 15 9605 NP_000373 15 9605 NP_938020 15 9605 XP_006724543 15 9605 XP_006724542 15 9605 XP_005274533 15 9605 XP_005274532 15 9605 XP_006724541 15 9605 XP_005274531 15 9605 XP_006724540 15 9605 XP_005274530 15 9605 XP_005256272 15 9605 XP_006711216 15 9605 XP_005244942 15 9605 XP_005244941 15 9605 XP_005244940 15 9605 XP_006711215 15 9605 XP_005244939 15 9605 XP_006711214 15 9605 XP_005244938 15 9605 XP_005244937 15 9605 NP_001026976 15 9605>NP_001073904 Length = 809 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVVTVITL 9 QE+VTV T+ Sbjct: 229 QELVTVATM 237>NP_005245 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 270 QQVITIVT 277>NP_852092 Length = 348 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 258 QQVITIVT 265>NP_002032 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 270 QQVITIVT 277>NP_001607 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QEVVTVITL 9 +++VTV+T+ Sbjct: 492 EDIVTVVTM 500>NP_057739 Length = 348 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 258 QQVITIVT 265>NP_057738 Length = 383 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 258 QQVITIVT 265>NP_001265509 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QEVVTVITL 9 +++VTV+T+ Sbjct: 384 EDIVTVVTM 392>NP_001265508 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 QEVVTVITL 9 +++VTV+T+ Sbjct: 492 EDIVTVVTM 500>XP_006720521 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 262 QQVITIVT 269>XP_006720520 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 263 QQVITIVT 270>XP_005254331 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 270 QQVITIVT 277>XP_005254330 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 270 QQVITIVT 277>XP_006720519 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 274 QQVITIVT 281>XP_006720518 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+V+T++T Sbjct: 275 QQVITIVT 282>XP_005272481 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVVTVITL 9 QE+VTV T+ Sbjct: 229 QELVTVATM 237>XP_005272478 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVVTVITL 9 QE+VTV T+ Sbjct: 16 QELVTVATM 24>NP_996816 Length = 5202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEVVTVITL 9 +EV T++TL Sbjct: 2667 EEVTTLVTL 2675>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+VVT++T Sbjct: 797 QDVVTIMT 804>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEVVTVIT 8 Q+VVT++T Sbjct: 797 QDVVTIMT 804>NP_653219 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 270 QRVITIVT 277>NP_001273429 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 QEV+ +IT Sbjct: 506 QEVIKIIT 513>NP_001018170 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 QEV+ +IT Sbjct: 414 QEVIKIIT 421>NP_001018169 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 QEV+ +IT Sbjct: 497 QEVIKIIT 504>NP_003896 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 QEV+ +IT Sbjct: 503 QEVIKIIT 510>NP_000373 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QEV+TV+ Sbjct: 59 QEVITVL 65>NP_938020 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_006724543 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_006724542 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_005274533 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_005274532 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_006724541 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_005274531 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 453 QEIITII 459>XP_006724540 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_005274530 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QE++T+I Sbjct: 473 QEIITII 479>XP_005256272 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 QEV+ +IT Sbjct: 414 QEVIKIIT 421>XP_006711216 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 214 QRVITIVT 221>XP_005244942 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 214 QRVITIVT 221>XP_005244941 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 232 QRVITIVT 239>XP_005244940 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 248 QRVITIVT 255>XP_006711215 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 270 QRVITIVT 277>XP_005244939 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 270 QRVITIVT 277>XP_006711214 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 286 QRVITIVT 293>XP_005244938 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 286 QRVITIVT 293>XP_005244937 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QEVVTVIT 8 Q V+T++T Sbjct: 286 QRVITIVT 293>NP_001026976 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QEVVTVI 7 QEV+TV+ Sbjct: 59 QEVITVL 65Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.133 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 335,606 Number of extensions: 529 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |