Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1935 XP_005266703 18 1935 NP_055428 17 4312 NP_001139281 16 5631 NP_006725 16 5631 NP_001070654 16 5631 NP_079005 16 5631 XP_006723449 16 5631 XP_005267014 16 5631 NP_055281 16 7355 NP_006314 16 7355 NP_001036199 16 7355 NP_853513 16 7355 XP_005262748 16 7355 XP_005262746 16 7355 XP_005262745 16 7355 XP_005270810 16 7355 NP_079066 15 9605 NP_001278268 15 9605 NP_065769 15 9605 XP_006721134 15 9605 XP_005255507 15 9605 XP_005269164 15 9605 XP_006716540 15 9605 XP_006716539 15 9605 XP_006716538 15 9605 XP_005251368 15 9605 XP_006716537 15 9605 XP_006716536 15 9605 XP_005251364 15 9605 XP_006716535 15 9605 XP_006716534 15 9605 XP_006716533 15 9605 XP_006716532 15 9605 XP_005251363 15 9605 XP_005251362 15 9605 NP_620710 15 9605 NP_003067 15 9605>NP_443179 Length = 2170 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 Q VQQQSLS Sbjct: 1135 QGVQQQSLS 1143>XP_005266703 Length = 1501 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 Q VQQQSLS Sbjct: 466 QGVQQQSLS 474>NP_055428 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 +EVQQQ L+ Sbjct: 323 EEVQQQKLA 331>NP_001139281 Length = 2036 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 QE+QQQS Sbjct: 923 QELQQQS 929>NP_006725 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 Q+VQQQS Sbjct: 867 QQVQQQS 873>NP_001070654 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 QE+QQQS Sbjct: 890 QELQQQS 896>NP_079005 Length = 1995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 QE+QQQS Sbjct: 882 QELQQQS 888>XP_006723449 Length = 2003 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 QE+QQQS Sbjct: 890 QELQQQS 896>XP_005267014 Length = 2446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 QEVQQQS 7 Q+VQQQS Sbjct: 867 QQVQQQS 873>NP_055281 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QEVQQQ 6 QEVQQQ Sbjct: 166 QEVQQQ 171>NP_006314 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QEVQQQSLS 9 Q QQQSLS Sbjct: 247 QHHQQQSLS 255>NP_001036199 Length = 1233 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QEVQQQSLS 9 Q QQQSLS Sbjct: 247 QHHQQQSLS 255>NP_853513 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 QE+Q +SLS Sbjct: 210 QELQYESLS 218>XP_005262748 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QEVQQQSLS 9 Q QQQSLS Sbjct: 278 QHHQQQSLS 286>XP_005262746 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QEVQQQSLS 9 Q QQQSLS Sbjct: 278 QHHQQQSLS 286>XP_005262745 Length = 1299 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QEVQQQSLS 9 Q QQQSLS Sbjct: 278 QHHQQQSLS 286>XP_005270810 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QEVQQQ 6 QEVQQQ Sbjct: 166 QEVQQQ 171>NP_079066 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1007 EIQQQAL 1013>NP_001278268 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 662 EIQQQAL 668>NP_065769 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 + VQ+QSLS Sbjct: 839 RSVQRQSLS 847>XP_006721134 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 + VQ+QSLS Sbjct: 576 RSVQRQSLS 584>XP_005255507 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEVQQQSLS 9 + VQ+QSLS Sbjct: 576 RSVQRQSLS 584>XP_005269164 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEVQQQSL 8 Q+VQQQ++ Sbjct: 233 QQVQQQAV 240>XP_006716540 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 865 EIQQQAL 871>XP_006716539 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1042 EIQQQAL 1048>XP_006716538 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 956 EIQQQAL 962>XP_005251368 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 971 EIQQQAL 977>XP_006716537 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 991 EIQQQAL 997>XP_006716536 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 998 EIQQQAL 1004>XP_005251364 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 998 EIQQQAL 1004>XP_006716535 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1006 EIQQQAL 1012>XP_006716534 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1006 EIQQQAL 1012>XP_006716533 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1006 EIQQQAL 1012>XP_006716532 Length = 1223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1009 EIQQQAL 1015>XP_005251363 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1034 EIQQQAL 1040>XP_005251362 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EVQQQSL 8 E+QQQ+L Sbjct: 1042 EIQQQAL 1048>NP_620710 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEVQQQSL 8 Q+VQQQ++ Sbjct: 109 QQVQQQAV 116>NP_003067 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEVQQQSL 8 Q+VQQQ++ Sbjct: 109 QQVQQQAV 116Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.100 0.209 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,438 Number of extensions: 781 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |