Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_003176 16 5631 NP_001175 16 7355 NP_057417 16 7355 NP_001164056 16 7355 NP_694566 16 7355 XP_005255284 16 7355 XP_005255283 16 7355 XP_006720936 16 7355 XP_006720935 16 7355 XP_005255282 16 7355 XP_006719000 16 7355 NP_612351 16 7355 NP_001073876 15 9605 XP_006718823 15 9605 NP_839943 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 2220 QEPIMALRT 2228>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 872 QEPIMALRT 880>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 1872 QEPIMALRT 1880>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 2214 QEPIMALRT 2222>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 2220 QEPIMALRT 2228>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 2220 QEPIMALRT 2228>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEPMMALRT 9 QEP+MALRT Sbjct: 2220 QEPIMALRT 2228>NP_003176 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QEPMMALR 8 Q PM+ALR Sbjct: 762 QTPMVALR 769>NP_001175 Length = 2644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QEPMMALR 8 +EP++ALR Sbjct: 1897 KEPILALR 1904>NP_057417 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2216 PLMSLRT 2222>NP_001164056 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEPMMALRT 9 ++P M+LRT Sbjct: 1436 EDPPMSLRT 1444>NP_694566 Length = 1458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEPMMALRT 9 ++P M+LRT Sbjct: 1447 EDPPMSLRT 1455>XP_005255284 Length = 2581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005255283 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_006720936 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2215 PLMSLRT 2221>XP_006720935 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005255282 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PMMALRT 9 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_006719000 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEPMMALRT 9 Q+P M LRT Sbjct: 154 QDPGMRLRT 162>NP_612351 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEPMMALRT 9 Q+P M LRT Sbjct: 154 QDPGMRLRT 162>NP_001073876 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEPMMALRT 9 Q+P + LRT Sbjct: 180 QDPRLLLRT 188>XP_006718823 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEPMMALRT 9 Q+P + LRT Sbjct: 538 QDPRLLLRT 546>NP_839943 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEPMMALR 8 Q+P +ALR Sbjct: 317 QDPALALR 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.123 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 553,862 Number of extensions: 491 Number of successful extensions: 22 Number of sequences better than 10000.0: 22 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 22 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |