Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 299 NP_001035957 20 299 XP_006721991 20 299 XP_006721990 20 299 XP_006721989 20 299 XP_005258041 20 299 XP_006721988 20 299 XP_006721987 20 299 XP_006721986 20 299 XP_005258040 20 299 XP_006721985 20 299 XP_005276506 19 869 XP_006720412 19 869 NP_056327 18 1935 XP_006713163 18 1935 NP_665798 16 5631 NP_665799 16 5631 NP_665801 16 5631 NP_055944 16 5631 NP_037402 16 5631 XP_006724813 16 5631 XP_006724812 16 5631 XP_006724811 16 5631 XP_005262457 16 5631 NP_689916 16 7355 NP_001193900 16 7355 NP_002828 16 7355 NP_001103224 16 7355 NP_001193901 16 7355 NP_060124 16 7355 NP_997328 16 7355 NP_001035858 16 7355 NP_057206 16 7355 NP_665741 16 7355 NP_001180236 16 7355 XP_005257067 16 7355 XP_006719592 16 7355 XP_006719591 16 7355 XP_005268999 16 7355 XP_006719500 16 7355 XP_006715953 16 7355 XP_006715952 16 7355 XP_005250250 16 7355 XP_006715951 16 7355 XP_005250248 16 7355 XP_006714322 16 7355 XP_005263179 16 7355 XP_005263178 16 7355 XP_005263177 16 7355 NP_060713 16 7355 NP_061198 15 9605 NP_000370 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 XP_006720670 15 9605 XP_006717822 15 9605 XP_006717821 15 9605 XP_005269749 15 9605 XP_006717820 15 9605 XP_005245779 15 9605 XP_005245778 15 9605 XP_005245777 15 9605 XP_005245776 15 9605 XP_005245775 15 9605 XP_005245774 15 9605 NP_065081 15 9605 NP_005830 15 9605 NP_001273 15 9605 NP_001025177 15 9605>NP_000258 Length = 2818 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1033 QEMKFRNKM 1041>NP_001035957 Length = 2839 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1033 QEMKFRNKM 1041>XP_006721991 Length = 1632 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_006721990 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_006721989 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_005258041 Length = 2836 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1033 QEMKFRNKM 1041>XP_006721988 Length = 2846 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_006721987 Length = 2849 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_006721986 Length = 2854 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1030 QEMKFRNKM 1038>XP_005258040 Length = 2857 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1033 QEMKFRNKM 1041>XP_006721985 Length = 2867 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QEMKF NKM Sbjct: 1043 QEMKFRNKM 1051>XP_005276506 Length = 151 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +EMKF NKM Sbjct: 66 REMKFRNKM 74>XP_006720412 Length = 128 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +EMKF NKM Sbjct: 43 REMKFRNKM 51>NP_056327 Length = 4265 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +EMKFS K+ Sbjct: 3692 EEMKFSKKL 3700>XP_006713163 Length = 4265 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +EMKFS K+ Sbjct: 3692 EEMKFSKKL 3700>NP_665798 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>NP_665799 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>NP_665801 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>NP_055944 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>NP_037402 Length = 385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QEMKFSN 7 QE+K+SN Sbjct: 214 QELKYSN 220>XP_006724813 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>XP_006724812 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>XP_006724811 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>XP_005262457 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 242 EELKIGNKM 250>NP_689916 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>NP_001193900 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1305 QEVEFSRKL 1313>NP_002828 Length = 1997 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1395 QEVEFSRKL 1403>NP_001103224 Length = 2215 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1613 QEVEFSRKL 1621>NP_001193901 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1305 QEVEFSRKL 1313>NP_060124 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 212 KMKFSNEV 219>NP_997328 Length = 183 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 Q+M SNK+ Sbjct: 85 QQMSLSNKL 93>NP_001035858 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +E+K SNK+ Sbjct: 313 KELKHSNKL 321>NP_057206 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +E+K SNK+ Sbjct: 313 KELKHSNKL 321>NP_665741 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+MK+ NK Sbjct: 600 QDMKWKNK 607>NP_001180236 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 212 KMKFSNEV 219>XP_005257067 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+MK+ NK Sbjct: 600 QDMKWKNK 607>XP_006719592 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1395 QEVEFSRKL 1403>XP_006719591 Length = 2230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 QE++FS K+ Sbjct: 1613 QEVEFSRKL 1621>XP_005268999 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +E+K SNK+ Sbjct: 313 KELKHSNKL 321>XP_006719500 Length = 701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QEMKFSNKM 9 +E+K SNK+ Sbjct: 313 KELKHSNKL 321>XP_006715953 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>XP_006715952 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>XP_005250250 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>XP_006715951 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>XP_005250248 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EMKFSNKM 9 +MKFSN++ Sbjct: 214 KMKFSNEV 221>XP_006714322 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 184 EEVKIGNKM 192>XP_005263179 Length = 435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 251 EEVKIGNKM 259>XP_005263178 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 251 EEVKIGNKM 259>XP_005263177 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 251 EEVKIGNKM 259>NP_060713 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QEMKFSNKM 9 +E+K NKM Sbjct: 241 EEVKIGNKM 249>NP_061198 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 QE+ FS+K Sbjct: 706 QELSFSDK 713>NP_000370 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EMKFSNKM 9 EMKF N + Sbjct: 267 EMKFKNML 274>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EMKFSNK 8 EM F+NK Sbjct: 753 EMNFTNK 759>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EMKFSNK 8 EM F+NK Sbjct: 753 EMNFTNK 759>XP_006720670 Length = 1712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 QE+ FS+K Sbjct: 706 QELSFSDK 713>XP_006717822 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QEMKFSNK 8 QE+KF K Sbjct: 645 QELKFDEK 652>XP_006717821 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QEMKFSNK 8 QE+KF K Sbjct: 645 QELKFDEK 652>XP_005269749 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QEMKFSNK 8 QE+KF K Sbjct: 645 QELKFDEK 652>XP_006717820 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QEMKFSNK 8 QE+KF K Sbjct: 645 QELKFDEK 652>XP_005245779 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>XP_005245778 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>XP_005245777 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>XP_005245776 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>XP_005245775 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>XP_005245774 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>NP_065081 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 QEMKFSNK 8 QE+KF K Sbjct: 645 QELKFDEK 652>NP_005830 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEMKFSNK 8 Q+ +FSNK Sbjct: 13 QDNRFSNK 20>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EMKFSNK 8 EM F+NK Sbjct: 739 EMNFTNK 745>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 EMKFSNK 8 EM F+NK Sbjct: 753 EMNFTNK 759Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.116 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,855 Number of extensions: 822 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |