Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 509 XP_006722001 17 2528 XP_006722000 17 2528 XP_006721999 17 2528 XP_006721998 17 2528 XP_006721997 17 2528 XP_006721996 17 2528 XP_006721995 17 2528 NP_057423 17 2528 NP_473447 16 5631 NP_059431 16 7355 NP_004219 16 7355 XP_006723536 16 7355 XP_006723535 16 7355 NP_004932 15 9605 NP_001077422 15 9605 NP_071348 15 9605 NP_001164209 15 9605 XP_005257171 15 9605 XP_005257170 15 9605 XP_006712132 15 9605 XP_006712130 15 9605 XP_006712129 15 9605 XP_006712128 15 9605 XP_006712127 15 9605 XP_006712126 15 9605 XP_006712125 15 9605 XP_006712124 15 9605 NP_659486 15 9605 NP_056047 15 9605 NP_001163887 15 9605>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QEGSKTLVL 9 +EGSKTLVL Sbjct: 830 EEGSKTLVL 838>XP_006722001 Length = 392 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 318 EGSKTLV 324>XP_006722000 Length = 456 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 382 EGSKTLV 388>XP_006721999 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 419 EGSKTLV 425>XP_006721998 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 419 EGSKTLV 425>XP_006721997 Length = 493 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 419 EGSKTLV 425>XP_006721996 Length = 511 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 437 EGSKTLV 443>XP_006721995 Length = 662 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 588 EGSKTLV 594>NP_057423 Length = 456 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKTLV Sbjct: 382 EGSKTLV 388>NP_473447 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EG+KTLV Sbjct: 5 EGNKTLV 11>NP_059431 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EGSKTL 7 EGSKTL Sbjct: 54 EGSKTL 59>NP_004219 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EGSKTL 7 EGSKTL Sbjct: 54 EGSKTL 59>XP_006723536 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EGSKTL 7 EGSKTL Sbjct: 76 EGSKTL 81>XP_006723535 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 EGSKTL 7 EGSKTL Sbjct: 76 EGSKTL 81>NP_004932 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEGSKTLV 8 QEG +TL+ Sbjct: 1121 QEGYRTLI 1128>NP_001077422 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1924 KEGEDTLVL 1932>NP_071348 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1924 KEGEDTLVL 1932>NP_001164209 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QEGSKTL 7 Q+G+KTL Sbjct: 996 QQGTKTL 1002>XP_005257171 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEGSKTLV 8 QEG +TL+ Sbjct: 1121 QEGYRTLI 1128>XP_005257170 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QEGSKTLV 8 QEG +TL+ Sbjct: 1119 QEGYRTLI 1126>XP_006712132 Length = 1136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1107 KEGEDTLVL 1115>XP_006712130 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1802 KEGEDTLVL 1810>XP_006712129 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1803 KEGEDTLVL 1811>XP_006712128 Length = 1879 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1850 KEGEDTLVL 1858>XP_006712127 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1880 KEGEDTLVL 1888>XP_006712126 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1884 KEGEDTLVL 1892>XP_006712125 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1923 KEGEDTLVL 1931>XP_006712124 Length = 1953 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG TLVL Sbjct: 1924 KEGEDTLVL 1932>NP_659486 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QEGSKTLVL 9 +EG K LVL Sbjct: 134 REGKKLLVL 142>NP_056047 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QEGSKTL 7 Q+G+KTL Sbjct: 693 QQGTKTL 699>NP_001163887 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSKTLV 8 EGSKT++ Sbjct: 44 EGSKTIL 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.124 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 591,029 Number of extensions: 858 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |