Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 21 229 NP_001035957 21 229 XP_006721991 21 229 XP_006721990 21 229 XP_006721989 21 229 XP_005258041 21 229 XP_006721988 21 229 XP_006721987 21 229 XP_006721986 21 229 XP_005258040 21 229 XP_006721985 21 229 NP_001167565 17 2528 NP_001167566 17 2528 NP_110378 17 2528 NP_001167567 17 2528 NP_001167564 17 2528 NP_001121600 17 2528 NP_057323 17 2528 XP_005256732 17 2528 XP_005252632 17 2528 XP_005252633 17 2528 XP_006717562 17 2528 XP_006717561 17 2528 XP_006717560 17 2528 NP_057692 16 7355 NP_000926 16 7355 NP_891988 16 7355 XP_005247593 16 7355 XP_005247592 16 7355 NP_001165124 15 9605 NP_055610 15 9605 NP_055688 15 9605 XP_006712945 15 9605 XP_006712944 15 9605 XP_005273421 15 9605 XP_006711758 15 9605 XP_005273420 15 9605 XP_005273419 15 9605>NP_000258 Length = 2818 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 786 QATKLILNY 794>NP_001035957 Length = 2839 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 786 QATKLILNY 794>XP_006721991 Length = 1632 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>XP_006721990 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>XP_006721989 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>XP_005258041 Length = 2836 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 786 QATKLILNY 794>XP_006721988 Length = 2846 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>XP_006721987 Length = 2849 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>XP_006721986 Length = 2854 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 783 QATKLILNY 791>XP_005258040 Length = 2857 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 786 QATKLILNY 794>XP_006721985 Length = 2867 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QATKLIINY 9 QATKLI+NY Sbjct: 796 QATKLILNY 804>NP_001167565 Length = 1107 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 454 TKIIINY 460>NP_001167566 Length = 1057 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 404 TKIIINY 410>NP_110378 Length = 1124 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 471 TKIIINY 477>NP_001167567 Length = 1125 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 472 TKIIINY 478>NP_001167564 Length = 1104 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 451 TKIIINY 457>NP_001121600 Length = 1108 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 455 TKIIINY 461>NP_057323 Length = 3530 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QATKLIINY 9 +ATKLI+ Y Sbjct: 1323 EATKLILRY 1331>XP_005256732 Length = 3531 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QATKLIINY 9 +ATKLI+ Y Sbjct: 1323 EATKLILRY 1331>XP_005252632 Length = 906 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 253 TKIIINY 259>XP_005252633 Length = 906 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 253 TKIIINY 259>XP_006717562 Length = 906 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 253 TKIIINY 259>XP_006717561 Length = 906 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 253 TKIIINY 259>XP_006717560 Length = 906 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+IINY Sbjct: 253 TKIIINY 259>NP_057692 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QATKLIINY 9 Q KLIIN+ Sbjct: 346 QIMKLIINF 354>NP_000926 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+++NY Sbjct: 258 TKILLNY 264>NP_891988 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+++NY Sbjct: 258 TKILLNY 264>XP_005247593 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+++NY Sbjct: 258 TKILLNY 264>XP_005247592 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TKLIINY 9 TK+++NY Sbjct: 166 TKILLNY 172>NP_001165124 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATKLIINY 9 ATK II+Y Sbjct: 497 ATKSIIDY 504>NP_055610 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATKLIINY 9 ATK II+Y Sbjct: 521 ATKSIIDY 528>NP_055688 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATKLIIN 8 ATK+I+N Sbjct: 217 ATKIILN 223>XP_006712945 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATKLIINY 9 ATK II+Y Sbjct: 521 ATKSIIDY 528>XP_006712944 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATKLIINY 9 ATK II+Y Sbjct: 521 ATKSIIDY 528>XP_005273421 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATKLIIN 8 ATK+I+N Sbjct: 217 ATKIILN 223>XP_006711758 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATKLIIN 8 ATK+I+N Sbjct: 235 ATKIILN 241>XP_005273420 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATKLIIN 8 ATK+I+N Sbjct: 243 ATKIILN 249>XP_005273419 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ATKLIIN 8 ATK+I+N Sbjct: 250 ATKIILN 256Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 311,872 Number of extensions: 313 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |