Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_001265003 18 1935 NP_000084 18 1935 NP_001161795 17 3301 NP_660316 17 3301 NP_001161796 17 3301 NP_001161794 17 3301 XP_005257133 17 3301 XP_005257132 17 3301 XP_006721785 17 3301 XP_006721784 17 3301 NP_036233 17 4312 XP_005271544 17 4312 NP_005215 16 5631 NP_079001 16 5631 NP_001007034 16 5631 XP_005259572 16 5631 XP_005259570 16 5631 XP_005259571 16 5631 XP_005259569 16 5631 XP_006718975 16 5631 XP_006718974 16 5631 XP_006718973 16 5631 XP_006718972 16 5631 XP_005274350 16 5631 XP_005274349 16 5631 XP_005245269 16 5631 XP_006711403 16 5631 NP_036387 16 5631 NP_653300 16 5631 NP_001001734 16 5631 NP_001946 15 9605 NP_001161791 15 9605 NP_114113 15 9605 NP_060485 15 9605 NP_733751 15 9605 NP_001153505 15 9605 NP_001186064 15 9605 NP_597841 15 9605 NP_004171 15 9605 NP_065784 15 9605 XP_006716142 15 9605 XP_005250088 15 9605 XP_006716141 15 9605 XP_005250085 15 9605 XP_006716140 15 9605 XP_005250084 15 9605 XP_005250083 15 9605 XP_005250082 15 9605 XP_005247723 15 9605 XP_005246268 15 9605 XP_005246267 15 9605 XP_005246265 15 9605 XP_005246264 15 9605 XP_005246263 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QASETRRNS 9 QASET RNS Sbjct: 246 QASETLRNS 254>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QASETRRNS 9 QASET RNS Sbjct: 246 QASETLRNS 254>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QASETRRNS 9 QASET RNS Sbjct: 246 QASETLRNS 254>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QASETRRNS 9 QASET RNS Sbjct: 246 QASETLRNS 254>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QASETRRNS 9 QASET RNS Sbjct: 246 QASETLRNS 254>NP_001265003 Length = 1838 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 QASETRRN 8 QAS TRRN Sbjct: 1579 QASRTRRN 1586>NP_000084 Length = 1838 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 QASETRRN 8 QAS TRRN Sbjct: 1579 QASRTRRN 1586>NP_001161795 Length = 273 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 246 QATETQRN 253>NP_660316 Length = 332 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 280 QATETQRN 287>NP_001161796 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 195 QATETQRN 202>NP_001161794 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 280 QATETQRN 287>XP_005257133 Length = 287 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 195 QATETQRN 202>XP_005257132 Length = 321 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 229 QATETQRN 236>XP_006721785 Length = 338 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 246 QATETQRN 253>XP_006721784 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 QA+ET+RN Sbjct: 280 QATETQRN 287>NP_036233 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QASETRRNS 9 + ETRRNS Sbjct: 144 EPGETRRNS 152>XP_005271544 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QASETRRNS 9 + ETRRNS Sbjct: 144 EPGETRRNS 152>NP_005215 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QASETRRNS 9 QASE+R++S Sbjct: 498 QASESRQDS 506>NP_079001 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>NP_001007034 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 195 ETRRNS 200>XP_005259572 Length = 342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QASETRRNS 9 QASE+R++S Sbjct: 247 QASESRQDS 255>XP_005259570 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QASETRRNS 9 QASE+R++S Sbjct: 498 QASESRQDS 506>XP_005259571 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QASETRRNS 9 QASE+R++S Sbjct: 498 QASESRQDS 506>XP_005259569 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 QASETRRNS 9 QASE+R++S Sbjct: 498 QASESRQDS 506>XP_006718975 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718974 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718973 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_006718972 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_005274350 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_005274349 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 8 ETRRNS 13>XP_005245269 Length = 532 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 S+TRRNS Sbjct: 446 SKTRRNS 452>XP_006711403 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 S+TRRNS Sbjct: 875 SKTRRNS 881>NP_036387 Length = 950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ETRRNS 9 ETRRNS Sbjct: 673 ETRRNS 678>NP_653300 Length = 1029 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 S+TRRNS Sbjct: 943 SKTRRNS 949>NP_001001734 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 S+TRRNS Sbjct: 79 SKTRRNS 85>NP_001946 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SETRRNS 9 SET RNS Sbjct: 179 SETMRNS 185>NP_001161791 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SETRRNS 9 SET RNS Sbjct: 178 SETMRNS 184>NP_114113 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QASETRRN 8 +A ET+RN Sbjct: 809 KAKETKRN 816>NP_060485 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASETRRNS 9 ASET RN+ Sbjct: 573 ASETLRNA 580>NP_733751 Length = 4911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4046 KSSESRRN 4053>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QASETR 6 QASETR Sbjct: 1255 QASETR 1260>NP_001186064 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 82 SETRKNN 88>NP_597841 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 82 SETRKNN 88>NP_004171 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 82 SETRKNN 88>NP_065784 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASETRRNS 9 A E+RRNS Sbjct: 378 AVESRRNS 385>XP_006716142 Length = 4927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4062 KSSESRRN 4069>XP_005250088 Length = 4928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4063 KSSESRRN 4070>XP_006716141 Length = 4959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4094 KSSESRRN 4101>XP_005250085 Length = 4979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4118 KSSESRRN 4125>XP_006716140 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4117 KSSESRRN 4124>XP_005250084 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4117 KSSESRRN 4124>XP_005250083 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4117 KSSESRRN 4124>XP_005250082 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QASETRRN 8 ++SE+RRN Sbjct: 4118 KSSESRRN 4125>XP_005247723 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASETRRNS 9 A E+RRNS Sbjct: 378 AVESRRNS 385>XP_005246268 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 83 SETRKNN 89>XP_005246267 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 83 SETRKNN 89>XP_005246265 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 141 SETRKNN 147>XP_005246264 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 189 SETRKNN 195>XP_005246263 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SETRRNS 9 SETR+N+ Sbjct: 190 SETRKNN 196Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.0967 0.220 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,957 Number of extensions: 300 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |