Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 XP_005249326 17 4312 XP_006715218 17 4312 NP_068762 17 4312 NP_005742 16 5631 NP_671714 16 5631 XP_006715890 16 5631 XP_005250160 16 5631 XP_005250159 16 5631 NP_001277114 16 7355 NP_068375 16 7355 XP_005249641 16 7355 NP_066939 16 7355 NP_003280 15 9605 NP_998839 15 9605 NP_997320 15 9605 XP_005253612 15 9605 XP_005251629 15 9605 XP_005251628 15 9605 XP_005251627 15 9605 XP_005251626 15 9605 XP_005251625 15 9605 XP_005251624 15 9605 XP_005251623 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 682 QAQTKLEVA 690>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 682 QAQTKLEVA 690>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 682 QAQTKLEVA 690>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 679 QAQTKLEVA 687>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 682 QAQTKLEVA 690>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 QAQTKLEMA 9 QAQTKLE+A Sbjct: 692 QAQTKLEVA 700>XP_005249326 Length = 205 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAQTKLEM 8 Q QTKLE+ Sbjct: 137 QCQTKLEL 144>XP_006715218 Length = 218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAQTKLEM 8 Q QTKLE+ Sbjct: 159 QCQTKLEL 166>NP_068762 Length = 227 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAQTKLEM 8 Q QTKLE+ Sbjct: 159 QCQTKLEL 166>NP_005742 Length = 3907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQTKLEM 8 AQTKLE+ Sbjct: 3169 AQTKLEL 3175>NP_671714 Length = 3899 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQTKLEM 8 AQTKLE+ Sbjct: 3161 AQTKLEL 3167>XP_006715890 Length = 3860 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQTKLEM 8 AQTKLE+ Sbjct: 3122 AQTKLEL 3128>XP_005250160 Length = 3939 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQTKLEM 8 AQTKLE+ Sbjct: 3201 AQTKLEL 3207>XP_005250159 Length = 3952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AQTKLEM 8 AQTKLE+ Sbjct: 3214 AQTKLEL 3220>NP_001277114 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTKLEM 8 QTKLEM Sbjct: 348 QTKLEM 353>NP_068375 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTKLEM 8 QTKLEM Sbjct: 358 QTKLEM 363>XP_005249641 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTKLEMA 9 QT+LEMA Sbjct: 577 QTELEMA 583>NP_066939 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QTKLEMA 9 QT+LEMA Sbjct: 577 QTELEMA 583>NP_003280 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>NP_998839 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QAQTKL 6 QAQTKL Sbjct: 2128 QAQTKL 2133>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QAQTKL 6 QAQTKL Sbjct: 2246 QAQTKL 2251>XP_005251629 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251628 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251627 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251626 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251625 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251624 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74>XP_005251623 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAQTKLEMA 9 +AQ KLE A Sbjct: 66 EAQEKLEQA 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.106 0.238 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,929 Number of extensions: 535 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |