Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_057636 18 1935 NP_001269710 18 1935 NP_001269709 18 1935 NP_001269700 18 1935 XP_006712635 18 1935 XP_006712634 18 1935 XP_006712633 18 1935 XP_006712632 18 1935 XP_005247077 18 1935 XP_006712631 18 1935 XP_006712630 18 1935 NP_665803 17 4312 NP_001275644 16 5631 NP_001166094 16 5631 NP_002490 16 5631 NP_001323 16 5631 XP_005254473 16 5631 XP_005254472 16 5631 XP_005254471 16 5631 XP_005254470 16 5631 XP_005254469 16 5631 XP_005254468 16 5631 XP_005254467 16 5631 XP_005254465 16 5631 XP_005248310 16 5631 XP_005248309 16 5631 XP_005248308 16 5631 NP_001166095 16 5631 NP_001714 16 7355 NP_009171 16 7355 XP_005249383 16 7355 XP_005244919 16 7355 NP_037483 15 9605 NP_078966 15 9605 NP_065684 15 9605 NP_001193762 15 9605 NP_874369 15 9605 NP_006379 15 9605 NP_874368 15 9605 NP_001193856 15 9605 NP_057363 15 9605 XP_006718484 15 9605 XP_006715067 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3876 QAMYSSTDT 3884>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3892 QAMYSSTDT 3900>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAMYYSTDT 9 QAMY STDT Sbjct: 3893 QAMYSSTDT 3901>NP_057636 Length = 941 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 646 YYSTDT 651>NP_001269710 Length = 702 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 407 YYSTDT 412>NP_001269709 Length = 720 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 505 YYSTDT 510>NP_001269700 Length = 1030 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 735 YYSTDT 740>XP_006712635 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 315 YYSTDT 320>XP_006712634 Length = 703 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 408 YYSTDT 413>XP_006712633 Length = 711 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 416 YYSTDT 421>XP_006712632 Length = 764 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 505 YYSTDT 510>XP_005247077 Length = 778 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 483 YYSTDT 488>XP_006712631 Length = 800 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 505 YYSTDT 510>XP_006712630 Length = 941 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 YYSTDT 9 YYSTDT Sbjct: 646 YYSTDT 651>NP_665803 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAMYYSTD 8 +AMYYS + Sbjct: 719 EAMYYSAE 726>NP_001275644 Length = 1134 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMYYSTDT 9 A+YYS+ T Sbjct: 160 ALYYSSST 167>NP_001166094 Length = 1408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>NP_002490 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>NP_001323 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMYYSTDT 9 A+YYS+ T Sbjct: 251 ALYYSSST 258>XP_005254473 Length = 1408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254472 Length = 1428 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 1012 IYYSTD 1017>XP_005254471 Length = 1450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254470 Length = 1454 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 996 IYYSTD 1001>XP_005254469 Length = 1461 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>XP_005254468 Length = 1465 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 996 IYYSTD 1001>XP_005254467 Length = 1470 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 1012 IYYSTD 1017>XP_005254465 Length = 1481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 1012 IYYSTD 1017>XP_005248310 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMYYSTDT 9 A+YYS+ T Sbjct: 160 ALYYSSST 167>XP_005248309 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMYYSTDT 9 A+YYS+ T Sbjct: 237 ALYYSSST 244>XP_005248308 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AMYYSTDT 9 A+YYS+ T Sbjct: 251 ALYYSSST 258>NP_001166095 Length = 1450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MYYSTD 8 +YYSTD Sbjct: 992 IYYSTD 997>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QAMYYS 6 QA+YYS Sbjct: 2299 QALYYS 2304>NP_009171 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QAMYYSTDT 9 QAM Y DT Sbjct: 166 QAMGYEVDT 174>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 QAMYYS 6 QA+YYS Sbjct: 2836 QALYYS 2841>XP_005244919 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QAMYYSTDT 9 QAM Y DT Sbjct: 36 QAMGYEVDT 44>NP_037483 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAMYYSTDT 9 ++MY S DT Sbjct: 329 ESMYTSVDT 337>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AMYYSTDT 9 AM++ST+T Sbjct: 5415 AMHHSTNT 5422>NP_065684 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MYYSTDT 9 ++YSTD+ Sbjct: 20 LFYSTDS 26>NP_001193762 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 QAMYYSTD 8 + +YY TD Sbjct: 308 KTLYYDTD 315>NP_874369 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 QAMYYSTD 8 + +YY TD Sbjct: 360 KTLYYDTD 367>NP_006379 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 QAMYYSTD 8 + +YY TD Sbjct: 327 KTLYYDTD 334>NP_874368 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 QAMYYSTD 8 + +YY TD Sbjct: 275 KTLYYDTD 282>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QAMYYSTDT 9 Q YY TD+ Sbjct: 2630 QPYYYPTDS 2638>NP_057363 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 AMYYST 7 AMYY T Sbjct: 489 AMYYET 494>XP_006718484 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 QAMYYSTD 8 + +YY TD Sbjct: 336 KTLYYDTD 343>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QAMYYSTDT 9 Q YY TD+ Sbjct: 2630 QPYYYPTDS 2638Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.114 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,358 Number of extensions: 705 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |