Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_001269475 17 4312 NP_001269476 17 4312 NP_114406 17 4312 NP_055690 16 5631 NP_060729 16 5631 XP_005253074 16 5631 XP_006718326 16 5631 XP_005253073 16 5631 NP_001077088 16 5631 NP_000817 16 5631 NP_001077089 16 5631 NP_008919 16 7355 NP_001166175 16 7355 NP_000665 16 7355 NP_001041695 16 7355 NP_620686 16 7355 NP_777551 16 7355 NP_115892 16 7355 NP_001035269 16 7355 XP_005267375 16 7355 XP_005267374 16 7355 XP_005244956 16 7355 NP_001231696 15 9605 NP_775739 15 9605 NP_001231695 15 9605 NP_001122089 15 9605 NP_114128 15 9605 NP_001273541 15 9605 NP_001273540 15 9605 NP_015564 15 9605 NP_001070711 15 9605 NP_057595 15 9605 NP_001074444 15 9605 NP_004717 15 9605 NP_060691 15 9605 XP_005274683 15 9605 XP_005274682 15 9605 XP_006724586 15 9605 XP_005274681 15 9605 XP_006718886 15 9605 XP_005271575 15 9605 XP_005267236 15 9605 XP_005267235 15 9605 XP_006715650 15 9605 XP_005267234 15 9605 XP_006714478 15 9605 XP_005265766 15 9605 NP_000820 15 9605 NP_001106283 15 9605 NP_000819 15 9605 NP_001070712 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QALTITTF 8 QALTITTF Sbjct: 1368 QALTITTF 1375>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 QALTITTF 8 QALTITTF Sbjct: 1163 QALTITTF 1170>NP_001269475 Length = 440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTITTFC 9 +TIT FC Sbjct: 217 ITITNFC 223>NP_001269476 Length = 435 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTITTFC 9 +TIT FC Sbjct: 212 ITITNFC 218>NP_114406 Length = 435 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LTITTFC 9 +TIT FC Sbjct: 212 ITITNFC 218>NP_055690 Length = 1648 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 Q+LTI T C Sbjct: 1304 QSLTIQTAC 1312>NP_060729 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 QAL +TT C Sbjct: 714 QALKLTTKC 722>XP_005253074 Length = 956 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 QAL +TT C Sbjct: 714 QALKLTTKC 722>XP_006718326 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 QAL +TT C Sbjct: 484 QALKLTTKC 492>XP_005253073 Length = 1198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 QAL +TT C Sbjct: 714 QALKLTTKC 722>NP_001077088 Length = 883 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TITTFC 9 TIT+FC Sbjct: 99 TITSFC 104>NP_000817 Length = 883 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TITTFC 9 TIT+FC Sbjct: 99 TITSFC 104>NP_001077089 Length = 836 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TITTFC 9 TIT+FC Sbjct: 52 TITSFC 57>NP_008919 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 326 ALTLRNFC 333>NP_001166175 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QALTITTFC 9 QA+ +TT C Sbjct: 582 QAILLTTSC 590>NP_000665 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QALTITTFC 9 QAL TFC Sbjct: 38 QALRDATFC 46>NP_001041695 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QALTITTFC 9 QAL TFC Sbjct: 38 QALRDATFC 46>NP_620686 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 286 ALTLRNFC 293>NP_777551 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LTITTFC 9 LT+++FC Sbjct: 255 LTVSSFC 261>NP_115892 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTITTF 8 LTITTF Sbjct: 201 LTITTF 206>NP_001035269 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LTITTF 8 LTITTF Sbjct: 201 LTITTF 206>XP_005267375 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LTITTFC 9 LT+++FC Sbjct: 255 LTVSSFC 261>XP_005267374 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LTITTFC 9 LT+++FC Sbjct: 255 LTVSSFC 261>XP_005244956 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 QALTITTFC 9 QAL TFC Sbjct: 71 QALRDATFC 79>NP_001231696 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 74 TITDFC 79>NP_775739 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 74 TITDFC 79>NP_001231695 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 79 TITDFC 84>NP_001122089 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>NP_114128 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>NP_001273541 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>NP_001273540 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>NP_015564 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 112 TLTSFC 117>NP_001070711 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110>NP_057595 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ T C Sbjct: 51 ALTLLTLC 58>NP_001074444 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 333 ALTLPEFC 340>NP_004717 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 334 ALTLPEFC 341>NP_060691 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 74 TITEFC 79>XP_005274683 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 333 ALTLPEFC 340>XP_005274682 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 334 ALTLPEFC 341>XP_006724586 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 334 ALTLPEFC 341>XP_005274681 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 334 ALTLPEFC 341>XP_006718886 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110>XP_005271575 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110>XP_005267236 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>XP_005267235 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>XP_006715650 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 316 ALTLDEFC 323>XP_005267234 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ALTITTFC 9 ALT+ FC Sbjct: 337 ALTLDEFC 344>XP_006714478 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 32 TITDFC 37>XP_005265766 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TITTFC 9 TIT FC Sbjct: 79 TITDFC 84>NP_000820 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110>NP_001106283 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110>NP_000819 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 112 TLTSFC 117>NP_001070712 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TITTFC 9 T+T+FC Sbjct: 105 TLTSFC 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.133 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,968 Number of extensions: 428 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |