Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 869 NP_001091680 19 869 NP_001091679 19 869 XP_006713048 19 869 XP_005264943 19 869 NP_660288 17 2528 NP_005656 17 2528 NP_001153416 17 2528 XP_005272515 17 2528 XP_006710953 17 2528 XP_005271239 17 2528 XP_006710952 17 2528 XP_006710951 17 2528 XP_006710950 17 2528 XP_006710949 17 2528 XP_006710948 17 2528 XP_006710947 17 2528 XP_005271237 17 2528 XP_005271236 17 2528 NP_510880 17 4312 NP_976063 17 4312 NP_001103132 16 5631 NP_001264352 16 7355 XP_006724786 16 7355 XP_006710322 16 7355 NP_001104026 15 9605 NP_001447 15 9605 NP_742093 15 9605 NP_001269238 15 9605 NP_001274103 15 9605 NP_000343 15 9605 NP_001269239 15 9605 NP_473361 15 9605 NP_695000 15 9605 NP_079375 15 9605 NP_113584 15 9605 NP_001172035 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_006721642 15 9605 XP_006721641 15 9605 XP_006718349 15 9605>NP_001895 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LMELDM Sbjct: 4 QADLMELDM 12>NP_001091680 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LMELDM Sbjct: 4 QADLMELDM 12>NP_001091679 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LMELDM Sbjct: 4 QADLMELDM 12>XP_006713048 Length = 720 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LMELDM Sbjct: 4 QADLMELDM 12>XP_005264943 Length = 781 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LMELDM Sbjct: 4 QADLMELDM 12>NP_660288 Length = 794 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 316 QAELMQLDM 324>NP_005656 Length = 810 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 364 QAELMQLDM 372>NP_001153416 Length = 805 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 316 QAELMQLDM 324>XP_005272515 Length = 805 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 316 QAELMQLDM 324>XP_006710953 Length = 689 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 183 QAELMQLDM 191>XP_005271239 Length = 781 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 275 QAELMQLDM 283>XP_006710952 Length = 782 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_006710951 Length = 783 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_006710950 Length = 807 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_006710949 Length = 814 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_006710948 Length = 818 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_006710947 Length = 818 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>XP_005271237 Length = 826 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 320 QAELMQLDM 328>XP_005271236 Length = 867 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 QA LM+LDM Sbjct: 361 QAELMQLDM 369>NP_510880 Length = 2054 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QAGLMELDM 9 +AGL++LD+ Sbjct: 1081 EAGLLQLDV 1089>NP_976063 Length = 2039 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 QAGLMELDM 9 +AGL++LD+ Sbjct: 1081 EAGLLQLDV 1089>NP_001103132 Length = 4284 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAGLMELD 8 Q GLME D Sbjct: 4171 QVGLMETD 4178>NP_001264352 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GLMELDM 9 GLM++DM Sbjct: 103 GLMKMDM 109>XP_006724786 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GLMELDM 9 GLM++DM Sbjct: 198 GLMKMDM 204>XP_006710322 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GLMELDM 9 GLM++DM Sbjct: 267 GLMKMDM 273>NP_001104026 Length = 2647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 +AGL E+D+ Sbjct: 1836 EAGLHEMDI 1844>NP_001447 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAGLMELDM 9 +AGL E+D+ Sbjct: 1828 EAGLHEMDI 1836>NP_742093 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 480 GLMEMD 485>NP_001269238 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 478 GLMEMD 483>NP_001274103 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAGLMEL 7 QAG++EL Sbjct: 870 QAGILEL 876>NP_000343 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAGLMEL 7 QAG++EL Sbjct: 869 QAGILEL 875>NP_001269239 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 484 GLMEMD 489>NP_473361 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 478 GLMEMD 483>NP_695000 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 142 GLMEID 147>NP_079375 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AGLMELD 8 AGL ELD Sbjct: 370 AGLYELD 376>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>NP_001172035 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GLMELD 8 GLME+D Sbjct: 142 GLMEID 147>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 QAGLMELD 8 Q GL++LD Sbjct: 842 QEGLLQLD 849>XP_006721642 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AGLMELD 8 AGL ELD Sbjct: 370 AGLYELD 376>XP_006721641 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AGLMELD 8 AGL ELD Sbjct: 370 AGLYELD 376>XP_006718349 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAGLMEL 7 QAG++EL Sbjct: 869 QAGILEL 875Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.135 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,055 Number of extensions: 862 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |