Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 509 XP_005250103 20 509 XP_005250102 20 509 NP_001135997 18 1935 NP_001135998 18 1935 NP_085142 18 1935 NP_001136000 18 1935 NP_001135999 18 1935 NP_001136001 18 1935 NP_001136002 18 1935 NP_001135996 18 1935 NP_002871 17 2528 XP_005265417 17 2528 XP_005265416 17 2528 XP_005265415 17 2528 XP_005265414 17 2528 XP_005265412 17 2528 NP_055877 17 3301 NP_001275656 17 3301 NP_001275657 17 3301 XP_006717794 17 3301 XP_005269715 17 3301 NP_055945 16 5631 NP_055858 16 5631 NP_071373 16 5631 NP_942568 16 5631 XP_006717793 16 5631 XP_006717495 16 5631 XP_006717494 16 5631 XP_006717493 16 5631 XP_006717492 16 5631 XP_006717490 16 5631 XP_006717489 16 5631 XP_006717488 16 5631 XP_006717487 16 5631 XP_006717486 16 5631 XP_005266015 16 5631 NP_001095896 16 7355 NP_001008225 16 7355 NP_060473 16 7355 NP_001119580 16 7355 NP_000330 16 7355 NP_001119579 16 7355 NP_001275896 16 7355 NP_001275894 16 7355 NP_077817 16 7355 NP_000880 16 7355 NP_001275893 16 7355 XP_005256176 16 7355 XP_005254586 16 7355 XP_005254585 16 7355 XP_005254584 16 7355 XP_006719439 16 7355 XP_005268909 16 7355 XP_005268908 16 7355 XP_005247869 16 7355 XP_006713830 16 7355 XP_005247867 16 7355 XP_005247863 16 7355 XP_005247862 16 7355 XP_005247861 16 7355 XP_005247860 16 7355 XP_005247859 16 7355 XP_005263921 16 7355 XP_005263920 16 7355 XP_005263919 16 7355 NP_001158184 15 9605 NP_000472 15 9605 NP_001273708 15 9605 NP_009049 15 9605 NP_115669 15 9605 NP_001158183 15 9605 NP_001243125 15 9605 NP_001645 15 9605 NP_056240 15 9605 XP_006724592 15 9605 XP_005252325 15 9605 XP_006717365 15 9605 XP_005252324 15 9605 XP_006714558 15 9605 XP_006712046 15 9605>NP_004324 Length = 766 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF NEVGV Sbjct: 496 QAFKNEVGV 504>XP_005250103 Length = 758 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF NEVGV Sbjct: 496 QAFKNEVGV 504>XP_005250102 Length = 767 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF NEVGV Sbjct: 496 QAFKNEVGV 504>NP_001135997 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001135998 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_085142 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001136000 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001135999 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001136001 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001136002 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_001135996 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NEVGV Sbjct: 358 QEFINEVGV 366>NP_002871 Length = 648 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 388 QAFRNEVAV 396>XP_005265417 Length = 494 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 388 QAFRNEVAV 396>XP_005265416 Length = 534 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 274 QAFRNEVAV 282>XP_005265415 Length = 567 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 307 QAFRNEVAV 315>XP_005265414 Length = 615 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 355 QAFRNEVAV 363>XP_005265412 Length = 648 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NEV V Sbjct: 388 QAFRNEVAV 396>NP_055877 Length = 1664 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1159 QAFISEIGI 1167>NP_001275656 Length = 1400 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1159 QAFISEIGI 1167>NP_001275657 Length = 1542 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1039 QAFISEIGI 1047>XP_006717794 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1159 QAFISEIGI 1167>XP_005269715 Length = 1230 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1159 QAFISEIGI 1167>NP_055945 Length = 1266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFTNEVGV 9 AF NE+G+ Sbjct: 573 AFQNEMGI 580>NP_055858 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFTNEVGV 9 AF NE+G+ Sbjct: 566 AFQNELGI 573>NP_071373 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF E+G+ Sbjct: 312 QAFFEEIGI 320>NP_942568 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AFTNEVGV 9 AF NE+G+ Sbjct: 566 AFQNELGI 573>XP_006717793 Length = 1603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 QAFTNEVGV 9 QAF +E+G+ Sbjct: 1159 QAFISEIGL 1167>XP_006717495 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_006717494 Length = 1571 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 380 QRFKNEIGM 388>XP_006717493 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 419 QRFKNEIGM 427>XP_006717492 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_006717490 Length = 1791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 600 QRFKNEIGM 608>XP_006717489 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_006717488 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_006717487 Length = 2071 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_006717486 Length = 2072 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 Q F NE+G+ Sbjct: 881 QRFKNEIGM 889>XP_005266015 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF E+G+ Sbjct: 312 QAFFEEIGI 320>NP_001095896 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF NE G+ Sbjct: 563 AFQNETGI 570>NP_001008225 Length = 1403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 +AF EVG+ Sbjct: 1161 EAFEKEVGI 1169>NP_060473 Length = 1416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 +AF EVG+ Sbjct: 1174 EAFEKEVGI 1182>NP_001119580 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF N VGV Sbjct: 224 AFANAVGV 231>NP_000330 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF N VGV Sbjct: 224 AFANAVGV 231>NP_001119579 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF N VGV Sbjct: 223 AFANAVGV 230>NP_001275896 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 415 QAFTNDL 421>NP_001275894 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 547 QAFTNDL 553>NP_077817 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 567 QAFTNDL 573>NP_000880 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAFTNEVG 8 QAF EVG Sbjct: 240 QAFEREVG 247>NP_001275893 Length = 579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 549 QAFTNDL 555>XP_005256176 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF N VGV Sbjct: 223 AFANAVGV 230>XP_005254586 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 +AF EVG+ Sbjct: 1150 EAFEKEVGI 1158>XP_005254585 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 +AF EVG+ Sbjct: 1163 EAFEKEVGI 1171>XP_005254584 Length = 1411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 +AF EVG+ Sbjct: 1169 EAFEKEVGI 1177>XP_006719439 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAFTNEVG 8 QAF EVG Sbjct: 240 QAFEREVG 247>XP_005268909 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAFTNEVG 8 QAF EVG Sbjct: 240 QAFEREVG 247>XP_005268908 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAFTNEVG 8 QAF EVG Sbjct: 240 QAFEREVG 247>XP_005247869 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 308 QAFTNDL 314>XP_006713830 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 391 QAFTNDL 397>XP_005247867 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 415 QAFTNDL 421>XP_005247863 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247862 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247861 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 547 QAFTNDL 553>XP_005247860 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005247859 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 QAFTNEV 7 QAFTN++ Sbjct: 567 QAFTNDL 573>XP_005263921 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF NE G+ Sbjct: 570 AFQNETGI 577>XP_005263920 Length = 1155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF NE G+ Sbjct: 578 AFQNETGI 585>XP_005263919 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AFTNEVGV 9 AF NE G+ Sbjct: 585 AFQNETGI 592>NP_001158184 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FTNEVG 8 FTNE G Sbjct: 119 FTNEAG 124>NP_000472 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FTNEVG 8 FTNE G Sbjct: 119 FTNEAG 124>NP_001273708 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QAFTNEVG 8 + F+NE+G Sbjct: 197 EMFSNEIG 204>NP_009049 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FTNEVGV 9 FT+E+GV Sbjct: 1538 FTSELGV 1544>NP_115669 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QAFTNEVG 8 + F+NE+G Sbjct: 219 EMFSNEIG 226>NP_001158183 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 FTNEVG 8 FTNE G Sbjct: 63 FTNEAG 68>NP_001243125 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NE+ V Sbjct: 352 QAFKNEMQV 360>NP_001645 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NE+ V Sbjct: 349 QAFKNEMQV 357>NP_056240 Length = 1720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TNEVGV 9 TNE+G+ Sbjct: 453 TNEIGI 458>XP_006724592 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAFTNEVGV 9 QAF NE+ V Sbjct: 354 QAFKNEMQV 362>XP_005252325 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QAFTNEVG 8 + F+NE+G Sbjct: 242 EMFSNEIG 249>XP_006717365 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QAFTNEVG 8 + F+NE+G Sbjct: 268 EMFSNEIG 275>XP_005252324 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 QAFTNEVG 8 + F+NE+G Sbjct: 282 EMFSNEIG 289>XP_006714558 Length = 2612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FTNEVGV 9 FT+E+GV Sbjct: 1053 FTSELGV 1059>XP_006712046 Length = 1612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 TNEVGV 9 TNE+G+ Sbjct: 345 TNEIGI 350Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.128 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,531 Number of extensions: 856 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |