Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1482 NP_001035957 18 1482 XP_005276506 18 1482 XP_006721991 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 XP_006720412 18 1482 NP_055059 18 1935 NP_067610 18 1935 NP_004351 17 3301 NP_036601 17 4312 NP_001014763 17 4312 NP_001976 17 4312 XP_006723832 17 4312 NP_940820 16 5631 NP_001028776 16 5631 NP_001028777 16 5631 NP_055266 16 5631 NP_001273654 16 5631 NP_065917 16 5631 XP_005249758 16 5631 XP_006715751 16 5631 XP_005249757 16 5631 XP_006715750 16 5631 NP_733751 16 7355 XP_006716142 16 7355 XP_005250088 16 7355 XP_006716141 16 7355 XP_005250085 16 7355 XP_006716140 16 7355 XP_005250084 16 7355 XP_005250083 16 7355 XP_005250082 16 7355 NP_000384 15 9605 NP_001013653 15 9605 NP_001138748 15 9605 NP_003401 15 9605 NP_003402 15 9605 NP_001171566 15 9605 NP_001171555 15 9605 NP_001171556 15 9605 NP_659498 15 9605 NP_001159489 15 9605 XP_006724936 15 9605 XP_005262627 15 9605 XP_005274651 15 9605 XP_006724578 15 9605 XP_005274649 15 9605 XP_005274648 15 9605 XP_006724577 15 9605 XP_006724576 15 9605 NP_001171557 15 9605>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1055 QAADDDV 1061>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1055 QAADDDV 1061>XP_005276506 Length = 151 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 88 QAADDDV 94>XP_006721991 Length = 1632 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1055 QAADDDV 1061>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1052 QAADDDV 1058>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1055 QAADDDV 1061>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 1065 QAADDDV 1071>XP_006720412 Length = 128 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 QAADDDV 7 QAADDDV Sbjct: 65 QAADDDV 71>NP_055059 Length = 1211 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AADDDVNV 9 AADDD N+ Sbjct: 261 AADDDYNI 268>NP_067610 Length = 566 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AADDDVNV 9 AADDD N+ Sbjct: 261 AADDDYNI 268>NP_004351 Length = 882 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ADDDVN 8 ADDDVN Sbjct: 289 ADDDVN 294>NP_036601 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QAADDD 6 QAADDD Sbjct: 64 QAADDD 69>NP_001014763 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAADDDVN 8 QA DDD N Sbjct: 216 QAIDDDCN 223>NP_001976 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAADDDVN 8 QA DDD N Sbjct: 125 QAIDDDCN 132>XP_006723832 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 QAADDD 6 QAADDD Sbjct: 64 QAADDD 69>NP_940820 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 569 QSDDDQVNV 577>NP_001028776 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 534 QSDDDQVNV 542>NP_001028777 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 564 QSDDDQVNV 572>NP_055266 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 529 QSDDDQVNV 537>NP_001273654 Length = 687 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADDDVNV 9 A DDVNV Sbjct: 302 ASDDVNV 308>NP_065917 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADDDVNV 9 A DDVNV Sbjct: 363 ASDDVNV 369>XP_005249758 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 569 QSDDDQVNV 577>XP_006715751 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 478 QSDDDQVNV 486>XP_005249757 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 569 QSDDDQVNV 577>XP_006715750 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q+ DD VNV Sbjct: 569 QSDDDQVNV 577>NP_733751 Length = 4911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 560 QAANKDVN 567>XP_006716142 Length = 4927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_005250088 Length = 4928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_006716141 Length = 4959 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_005250085 Length = 4979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_006716140 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_005250084 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>XP_005250083 Length = 4982 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 560 QAANKDVN 567>XP_005250082 Length = 4983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 QAADDDVN 8 QAA+ DVN Sbjct: 561 QAANKDVN 568>NP_000384 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 QAADDDVN 8 QAA DD N Sbjct: 1255 QAAPDDKN 1262>NP_001013653 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 DDDVN 8 DDDVN Sbjct: 255 DDDVN 259>NP_001138748 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 112 QQEDEDLNV 120>NP_003401 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>NP_003402 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 303 QQEDEDLNV 311>NP_001171566 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>NP_001171555 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>NP_001171556 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>NP_659498 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QAADDDVNV 9 Q DDVN+ Sbjct: 52 QTLKDDVNI 60>NP_001159489 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 QAADDDVNV 9 Q DDVN+ Sbjct: 52 QTLKDDVNI 60>XP_006724936 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 303 QQEDEDLNV 311>XP_005262627 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 303 QQEDEDLNV 311>XP_005274651 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 282 QPEDEDLNV 290>XP_006724578 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 346 QPEDEDLNV 354>XP_005274649 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>XP_005274648 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>XP_006724577 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 307 QPEDEDLNV 315>XP_006724576 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 346 QPEDEDLNV 354>NP_001171557 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 QAADDDVNV 9 Q D+D+NV Sbjct: 78 QPEDEDLNV 86Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.122 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 592,520 Number of extensions: 807 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |