Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 22 103 NP_004561 22 103 NP_001275703 22 103 XP_005253450 22 103 XP_006719151 22 103 NP_689948 18 1135 NP_001041659 17 2528 NP_001041660 17 2528 NP_001260 17 2528 NP_665894 17 2528 NP_665893 17 2528 XP_005253065 17 2528 XP_006718321 17 2528 XP_005253064 17 2528 XP_005253063 17 2528 XP_005253062 17 2528 NP_001041664 17 2528 NP_001104292 17 2528 NP_001129575 17 3301 NP_821174 17 3301 NP_689655 17 3301 NP_001273463 17 3301 NP_001273460 17 3301 NP_060340 17 3301 NP_001273462 17 3301 NP_001273465 17 3301 NP_001273464 17 3301 NP_001273461 17 3301 XP_005253906 17 3301 NP_055895 17 4312 NP_620060 17 4312 NP_036542 17 4312 NP_808592 17 4312 NP_004306 17 4312 NP_001120977 17 4312 NP_001107572 17 4312 NP_001107571 17 4312 NP_963869 17 4312 NP_001230262 17 4312 NP_001230261 17 4312 XP_005255309 17 4312 XP_005274459 17 4312 XP_005274458 17 4312 XP_005274457 17 4312 XP_005273561 17 4312 NP_919260 17 4312 NP_006562 16 5631 NP_001013725 16 7355 NP_004637 16 7355 NP_001138501 16 7355 NP_055917 16 7355 NP_775840 16 7355 XP_005259018 16 7355 XP_006722388 16 7355 XP_005254450 16 7355 XP_005254449 16 7355 XP_006715979 16 7355 XP_005250306 16 7355 XP_006710633 16 7355 XP_006710632 16 7355 XP_006710631 16 7355 XP_006710630 16 7355 XP_006710629 16 7355 XP_006710628 16 7355 XP_006710627 16 7355 XP_006710626 16 7355 NP_004130 15 9605 NP_705838 15 9605 NP_071445 15 9605 XP_006721306 15 9605 XP_006721305 15 9605 XP_005256141 15 9605 XP_006712654 15 9605 XP_006712652 15 9605 XP_006712651 15 9605>NP_001275701 Length = 1486 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVTVQIDFP 9 PVT+QIDFP Sbjct: 661 PVTLQIDFP 669>NP_004561 Length = 1445 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVTVQIDFP 9 PVT+QIDFP Sbjct: 620 PVTLQIDFP 628>NP_001275703 Length = 1264 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVTVQIDFP 9 PVT+QIDFP Sbjct: 439 PVTLQIDFP 447>XP_005253450 Length = 1486 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVTVQIDFP 9 PVT+QIDFP Sbjct: 661 PVTLQIDFP 669>XP_006719151 Length = 1486 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVTVQIDFP 9 PVT+QIDFP Sbjct: 661 PVTLQIDFP 669>NP_689948 Length = 473 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVTVQIDFP 9 P T+QI+FP Sbjct: 20 PRTIQIEFP 28>NP_001041659 Length = 452 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PV VQ+D P Sbjct: 196 PVQVQLDVP 204>NP_001041660 Length = 438 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PV VQ+D P Sbjct: 182 PVQVQLDVP 190>NP_001260 Length = 421 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PV VQ+D P Sbjct: 165 PVQVQLDVP 173>NP_665894 Length = 893 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>NP_665893 Length = 910 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>XP_005253065 Length = 788 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 385 PVTVQLPLP 393>XP_006718321 Length = 917 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>XP_005253064 Length = 934 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>XP_005253063 Length = 934 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>XP_005253062 Length = 934 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PVTVQ+ P Sbjct: 531 PVTVQLPLP 539>NP_001041664 Length = 421 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 PV VQ+D P Sbjct: 165 PVQVQLDVP 173>NP_001104292 Length = 395 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PVT+ IDF Sbjct: 132 PVTLHIDF 139>NP_001129575 Length = 1108 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PVTVQIDFP 9 P+T Q+++P Sbjct: 400 PITWQVEYP 408>NP_821174 Length = 1023 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVTVQIDFP 9 PVT Q+++P Sbjct: 366 PVTWQLEYP 374>NP_689655 Length = 429 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 246 PISIYFDFP 254>NP_001273463 Length = 259 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 88 PISIYFDFP 96>NP_001273460 Length = 345 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 174 PISIYFDFP 182>NP_060340 Length = 1024 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVTVQIDFP 9 PVT Q+++P Sbjct: 367 PVTWQLEYP 375>NP_001273462 Length = 259 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 88 PISIYFDFP 96>NP_001273465 Length = 341 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 177 PISIYFDFP 185>NP_001273464 Length = 417 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 246 PISIYFDFP 254>NP_001273461 Length = 345 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 174 PISIYFDFP 182>XP_005253906 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P+++ DFP Sbjct: 177 PISIYFDFP 185>NP_055895 Length = 1712 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P T+Q+D P Sbjct: 98 PATLQLDTP 106>NP_620060 Length = 1642 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P T+Q+D P Sbjct: 98 PATLQLDTP 106>NP_036542 Length = 853 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 829 PITVESDF 836>NP_808592 Length = 395 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV +DF Sbjct: 184 PLTVNLDF 191>NP_004306 Length = 411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV +DF Sbjct: 200 PLTVNLDF 207>NP_001120977 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV +DF Sbjct: 178 PLTVNLDF 185>NP_001107572 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 785 PITVESDF 792>NP_001107571 Length = 840 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 816 PITVESDF 823>NP_963869 Length = 910 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 886 PITVESDF 893>NP_001230262 Length = 879 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 855 PITVESDF 862>NP_001230261 Length = 923 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 899 PITVESDF 906>XP_005255309 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV+ DF Sbjct: 835 PITVESDF 842>XP_005274459 Length = 1503 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P T+Q+D P Sbjct: 98 PATLQLDTP 106>XP_005274458 Length = 1511 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P T+Q+D P Sbjct: 98 PATLQLDTP 106>XP_005274457 Length = 1705 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVTVQIDFP 9 P T+Q+D P Sbjct: 98 PATLQLDTP 106>XP_005273561 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P+TV +DF Sbjct: 162 PLTVNLDF 169>NP_919260 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PVTVQ+ + Sbjct: 151 PVTVQVSY 158>NP_006562 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 P T+Q+DF Sbjct: 159 PQTLQLDF 166>NP_001013725 Length = 1649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ D P Sbjct: 501 PVTIPSDLP 509>NP_004637 Length = 1241 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 +T+Q+ FP Sbjct: 332 ITLQVTFP 339>NP_001138501 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTVQIDFP 9 VT+ I FP Sbjct: 1329 VTINIQFP 1336>NP_055917 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1005 VTVEIDNP 1012>NP_775840 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ FP Sbjct: 1262 PVTMPFQFP 1270>XP_005259018 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 +T+Q+ FP Sbjct: 219 ITLQVTFP 226>XP_006722388 Length = 1511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTVQIDFP 9 VT+ I FP Sbjct: 1448 VTINIQFP 1455>XP_005254450 Length = 1505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ D P Sbjct: 501 PVTIPSDLP 509>XP_005254449 Length = 1626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ D P Sbjct: 501 PVTIPSDLP 509>XP_006715979 Length = 1136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ FP Sbjct: 1051 PVTMPFQFP 1059>XP_005250306 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVTVQIDFP 9 PVT+ FP Sbjct: 1085 PVTMPFQFP 1093>XP_006710633 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 829 VTVEIDNP 836>XP_006710632 Length = 1389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 968 VTVEIDNP 975>XP_006710631 Length = 1412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 991 VTVEIDNP 998>XP_006710630 Length = 1424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1003 VTVEIDNP 1010>XP_006710629 Length = 1425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1004 VTVEIDNP 1011>XP_006710628 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1005 VTVEIDNP 1012>XP_006710627 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1005 VTVEIDNP 1012>XP_006710626 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VTV+ID P Sbjct: 1005 VTVEIDNP 1012>NP_004130 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTVQID 7 PVT +ID Sbjct: 217 PVTTEID 223>NP_705838 Length = 4069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VTVQIDFP 9 V VQ+ FP Sbjct: 3373 VPVQVSFP 3380>NP_071445 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PV +Q+D+ Sbjct: 792 PVALQLDY 799>XP_006721306 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_006721305 Length = 985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_005256141 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PVTVQIDF 8 PV +Q+D+ Sbjct: 765 PVALQLDY 772>XP_006712654 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VT+ ID+P Sbjct: 236 VTILIDWP 243>XP_006712652 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VT+ ID+P Sbjct: 282 VTILIDWP 289>XP_006712651 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTVQIDFP 9 VT+ ID+P Sbjct: 282 VTILIDWP 289Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.149 0.472 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,652 Number of extensions: 1265 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |