Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1135 NP_001263689 18 1135 NP_001119584 18 1135 NP_001119586 18 1135 NP_001263625 18 1135 NP_001119590 18 1135 NP_001263690 18 1135 NP_001119585 18 1135 NP_001263624 18 1135 NP_001119588 18 1135 NP_001119587 18 1135 NP_001119589 18 1135 NP_653215 16 5631 NP_001157897 16 5631 NP_001129979 16 5631 XP_005276700 16 5631 XP_001130308 16 5631 XP_003403895 16 5631 NP_001157891 16 5631 NP_004971 16 7355 NP_751948 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_596870 16 7355 NP_001243779 16 7355 NP_596869 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_006710693 16 7355 XP_006710692 16 7355 XP_005270908 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_005378 15 9605 NP_624357 15 9605 NP_005135 15 9605 NP_624358 15 9605 NP_057404 15 9605 NP_060881 15 9605 NP_037411 15 9605 NP_001120864 15 9605 XP_005274286 15 9605 XP_005274285 15 9605 XP_005274284 15 9605 XP_005274283 15 9605 XP_005274282 15 9605 XP_005274281 15 9605 XP_005274280 15 9605 XP_005274279 15 9605 XP_006718305 15 9605 XP_006718304 15 9605 XP_006718303 15 9605 XP_005253007 15 9605 XP_006716430 15 9605 XP_005273626 15 9605>NP_000537 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 153 PGTRVRAMA 161>NP_001263689 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 114 PGTRVRAMA 122>NP_001119584 Length = 393 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 153 PGTRVRAMA 161>NP_001119586 Length = 341 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 153 PGTRVRAMA 161>NP_001263625 Length = 302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 114 PGTRVRAMA 122>NP_001119590 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 114 PGTRVRAMA 122>NP_001263690 Length = 354 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 114 PGTRVRAMA 122>NP_001119585 Length = 346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 153 PGTRVRAMA 161>NP_001263624 Length = 307 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 114 PGTRVRAMA 122>NP_001119588 Length = 209 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 21 PGTRVRAMA 29>NP_001119587 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 21 PGTRVRAMA 29>NP_001119589 Length = 214 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVTRVRAMA 9 P TRVRAMA Sbjct: 21 PGTRVRAMA 29>NP_653215 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>NP_001157897 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>NP_001129979 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>XP_005276700 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>XP_001130308 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>XP_003403895 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>NP_001157891 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVTRVRA 7 PVTR+R+ Sbjct: 60 PVTRIRS 66>NP_004971 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 P TR+R+M Sbjct: 563 PATRLRSM 570>NP_751948 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 P TR+R+M Sbjct: 544 PATRLRSM 551>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1352 PVSRIRSLS 1360>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1352 PVSRIRSLS 1360>NP_596870 Length = 5604 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1398 PVSRIRSLS 1406>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1398 PVSRIRSLS 1406>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1398 PVSRIRSLS 1406>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1399 PVSRIRSLS 1407>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1399 PVSRIRSLS 1407>XP_006710693 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 P TR+R+M Sbjct: 544 PATRLRSM 551>XP_006710692 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 P TR+R+M Sbjct: 563 PATRLRSM 570>XP_005270908 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 P TR+R+M Sbjct: 563 PATRLRSM 570>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1398 PVSRIRSLS 1406>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 PVTRVRAMA 9 PV+R+R+++ Sbjct: 1352 PVSRIRSLS 1360>NP_005378 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 556 PATRVRPKA 564>NP_624357 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 539 PATRVRPKA 547>NP_005135 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 PV R+RA+ Sbjct: 404 PVARLRAL 411>NP_624358 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 539 PATRVRPKA 547>NP_057404 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 539 PATRVRPKA 547>NP_060881 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 PV R+RA+ Sbjct: 404 PVARLRAL 411>NP_037411 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 895 PVTNIRA 901>NP_001120864 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 930 PVTNIRA 936>XP_005274286 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 817 PVTNIRA 823>XP_005274285 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 880 PVTNIRA 886>XP_005274284 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 904 PVTNIRA 910>XP_005274283 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 903 PVTNIRA 909>XP_005274282 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 904 PVTNIRA 910>XP_005274281 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 930 PVTNIRA 936>XP_005274280 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 931 PVTNIRA 937>XP_005274279 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVTRVRA 7 PVT +RA Sbjct: 931 PVTNIRA 937>XP_006718305 Length = 1743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 556 PATRVRPKA 564>XP_006718304 Length = 1753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 492 PATRVRPKA 500>XP_006718303 Length = 1792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 531 PATRVRPKA 539>XP_005253007 Length = 1817 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVTRVRAMA 9 P TRVR A Sbjct: 556 PATRVRPKA 564>XP_006716430 Length = 1135 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 PV R+RA+ Sbjct: 404 PVARLRAL 411>XP_005273626 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVTRVRAM 8 PV R+RA+ Sbjct: 404 PVARLRAL 411Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 306,263 Number of extensions: 344 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |