Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 20 299 NP_004451 17 2528 NP_870998 17 3301 XP_005259168 17 3301 NP_001263629 17 4312 NP_612202 17 4312 XP_005276193 17 4312 XP_005252339 17 4312 XP_005271430 17 4312 NP_116198 17 4312 NP_000426 16 5631 NP_115568 16 5631 NP_001121680 16 5631 NP_056159 16 5631 NP_005329 16 5631 NP_001230127 16 5631 NP_003176 16 5631 XP_005259981 16 5631 XP_006722200 16 5631 XP_006710440 16 5631 NP_787080 16 7355 NP_056372 16 7355 NP_005843 16 7355 NP_001005273 16 7355 NP_001264 16 7355 NP_851851 16 7355 XP_006721493 16 7355 XP_006721492 16 7355 XP_006721491 16 7355 XP_006721490 16 7355 XP_006721489 16 7355 XP_006721488 16 7355 XP_005256486 16 7355 XP_005256485 16 7355 XP_006721487 16 7355 XP_006721486 16 7355 XP_005256484 16 7355 XP_006719025 16 7355 XP_005253725 16 7355 XP_006719024 16 7355 XP_006719023 16 7355 XP_006719022 16 7355 XP_006719021 16 7355 NP_001005271 16 7355 NP_851852 16 7355 NP_001017526 16 7355 NP_002935 15 9605 NP_001185610 15 9605 NP_115746 15 9605 XP_006726619 15 9605 XP_006722985 15 9605 XP_006720414 15 9605 XP_006715611 15 9605 XP_006713986 15 9605 XP_005248074 15 9605 XP_005248073 15 9605 XP_006713985 15 9605 XP_005248072 15 9605 XP_006713984 15 9605 XP_005248071 15 9605 XP_005245610 15 9605 XP_006711654 15 9605 XP_006711653 15 9605 XP_006711652 15 9605 XP_006711651 15 9605 XP_006711650 15 9605 XP_006711649 15 9605 XP_006711648 15 9605 XP_006711647 15 9605 XP_006710040 15 9605 NP_059996 15 9605 NP_001139647 15 9605 NP_055868 15 9605>NP_005179 Length = 906 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVPAMLARR 9 PVPA+LARR Sbjct: 780 PVPAVLARR 788>NP_004451 Length = 760 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PVPAMLA 7 PVPAM+A Sbjct: 281 PVPAMIA 287>NP_870998 Length = 1461 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 PVPA ARR Sbjct: 178 PVPAAPARR 186>XP_005259168 Length = 1435 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 PVPA ARR Sbjct: 178 PVPAAPARR 186>NP_001263629 Length = 891 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 PVP MLA+ Sbjct: 263 PVPQMLAQ 270>NP_612202 Length = 892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 PVP MLA+ Sbjct: 263 PVPQMLAQ 270>XP_005276193 Length = 144 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P PA+ ARR Sbjct: 74 PPPALAARR 82>XP_005252339 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVPAMLARR 9 P+P +LAR+ Sbjct: 88 PLPILLARK 96>XP_005271430 Length = 144 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P PA+ ARR Sbjct: 74 PPPALAARR 82>NP_116198 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVPAMLARR 9 P+P +LAR+ Sbjct: 88 PLPILLARK 96>NP_000426 Length = 2321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VPAMLAR 8 VPA+LAR Sbjct: 1504 VPALLAR 1510>NP_115568 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PAML R Sbjct: 33 PTPAMLFR 40>NP_001121680 Length = 169 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P+P +ARR Sbjct: 46 PIPYCIARR 54>NP_056159 Length = 131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P+P +ARR Sbjct: 46 PIPYCIARR 54>NP_005329 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVPAMLARR 9 P+P +L+RR Sbjct: 14 PLPKVLSRR 22>NP_001230127 Length = 986 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVPAMLARR 9 P+P +L+RR Sbjct: 14 PLPKVLSRR 22>NP_003176 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PA LAR Sbjct: 275 PAPATLAR 282>XP_005259981 Length = 2269 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VPAMLAR 8 VPA+LAR Sbjct: 1452 VPALLAR 1458>XP_006722200 Length = 204 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PAML R Sbjct: 33 PTPAMLFR 40>XP_006710440 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVPAMLARR 9 P P++L+RR Sbjct: 3 PPPSLLSRR 11>NP_787080 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 PVP ARR Sbjct: 124 PVPRAAARR 132>NP_056372 Length = 1954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1407 PLPPLLAR 1414>NP_005843 Length = 1966 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1395 PLPPLLAR 1402>NP_001005273 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1395 PLPPLLAR 1402>NP_001264 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1399 PLPPLLAR 1406>NP_851851 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P P M ARR Sbjct: 545 PSPLMAARR 553>XP_006721493 Length = 2056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1450 PLPPLLAR 1457>XP_006721492 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_006721491 Length = 2025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_006721490 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1375 PLPPLLAR 1382>XP_006721489 Length = 2045 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_006721488 Length = 2056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1395 PLPPLLAR 1402>XP_005256486 Length = 2060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_005256485 Length = 2080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_006721487 Length = 2111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1450 PLPPLLAR 1457>XP_006721486 Length = 2114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_005256484 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>XP_006719025 Length = 1902 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1386 PLPPLLAR 1393>XP_005253725 Length = 1905 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1392 PLPPLLAR 1399>XP_006719024 Length = 1908 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1392 PLPPLLAR 1399>XP_006719023 Length = 1914 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1398 PLPPLLAR 1405>XP_006719022 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1399 PLPPLLAR 1406>XP_006719021 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1427 PLPPLLAR 1434>NP_001005271 Length = 2059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVPAMLAR 8 P+P +LAR Sbjct: 1454 PLPPLLAR 1461>NP_851852 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P P M ARR Sbjct: 423 PSPLMAARR 431>NP_001017526 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P P M ARR Sbjct: 454 PSPLMAARR 462>NP_002935 Length = 2347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VPAMLA 7 VPAMLA Sbjct: 1376 VPAMLA 1381>NP_001185610 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P+P +A+R Sbjct: 55 PIPHFIAKR 63>NP_115746 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 8 PIPDMLA 14>XP_006726619 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PA LAR Sbjct: 45 PTPAGLAR 52>XP_006722985 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 28 PIPDMLA 34>XP_006720414 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PA LAR Sbjct: 45 PTPAGLAR 52>XP_006715611 Length = 2342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VPAMLA 7 VPAMLA Sbjct: 1371 VPAMLA 1376>XP_006713986 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 526 PPPAAAARR 534>XP_005248074 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 526 PPPAAAARR 534>XP_005248073 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 493 PPPAAAARR 501>XP_006713985 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 515 PPPAAAARR 523>XP_005248072 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 521 PPPAAAARR 529>XP_006713984 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 526 PPPAAAARR 534>XP_005248071 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVPAMLARR 9 P PA ARR Sbjct: 526 PPPAAAARR 534>XP_005245610 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 546 PLPGMLA 552>XP_006711654 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006711653 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 40 PLPGMLA 46>XP_006711652 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006711651 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006711650 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006711649 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 546 PLPGMLA 552>XP_006711648 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006711647 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 547 PLPGMLA 553>XP_006710040 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVPAMLAR 8 P PA LAR Sbjct: 45 PTPAGLAR 52>NP_059996 Length = 131 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVPAMLARR 9 P+P +A+R Sbjct: 46 PIPHFIAKR 54>NP_001139647 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 8 PIPDMLA 14>NP_055868 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVPAMLA 7 P+P MLA Sbjct: 40 PLPGMLA 46Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.139 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 674,614 Number of extensions: 837 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |