Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 229 NP_036462 21 229 NP_001243397 21 229 NP_859526 21 229 NP_002543 21 229 NP_001177810 21 229 NP_001177808 21 229 NP_001177811 21 229 NP_859525 21 229 XP_005269721 21 229 XP_006712619 21 229 NP_001017969 18 1935 NP_060640 18 1935 XP_005258351 18 1935 XP_005258350 18 1935 XP_006716793 18 1935 XP_005251442 18 1935 NP_114171 17 3301 NP_000531 17 4312 NP_001036188 17 4312 NP_056355 17 4312 XP_006723382 17 4312 XP_006723381 17 4312 XP_006723380 17 4312 XP_006720533 17 4312 XP_006720532 17 4312 XP_005254354 17 4312 NP_065996 16 5631 XP_005270063 16 5631 XP_005270062 16 5631 XP_005270061 16 5631 NP_001366 16 5631 NP_008840 16 7355 NP_001139 16 7355 NP_001121685 16 7355 NP_001121684 16 7355 XP_005248621 16 7355 XP_006714729 16 7355 XP_006714728 16 7355 XP_006714257 16 7355 XP_005263002 16 7355 XP_005262999 16 7355 XP_006714252 16 7355 XP_006714251 16 7355 XP_006714250 16 7355 XP_006712404 16 7355 XP_005246412 16 7355 XP_006710844 16 7355 NP_689741 16 7355 NP_000950 16 7355 NP_001034674 16 7355 NP_110438 16 7355 NP_001005237 16 7355 NP_001706 15 9605 NP_004658 15 9605 NP_061092 15 9605 NP_001230925 15 9605 NP_001027 15 9605 NP_006827 15 9605 NP_003661 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_005272447 15 9605 XP_006716315 15 9605 XP_006716314 15 9605 XP_006716313 15 9605 XP_005247644 15 9605 XP_005247643 15 9605 XP_005247641 15 9605 XP_005247640 15 9605 XP_005247639 15 9605>NP_001243398 Length = 1781 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 PVL KAFQH Sbjct: 895 PVLRKAFQH 903>NP_036462 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 PVL KAFQH Sbjct: 1187 PVLRKAFQH 1195>NP_001243397 Length = 1890 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 PVL KAFQH Sbjct: 1004 PVLRKAFQH 1012>NP_859526 Length = 436 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 370 PVVMKAFEH 378>NP_002543 Length = 436 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 370 PVVMKAFEH 378>NP_001177810 Length = 352 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 286 PVVMKAFEH 294>NP_001177808 Length = 436 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 370 PVVMKAFEH 378>NP_001177811 Length = 362 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 296 PVVMKAFEH 304>NP_859525 Length = 436 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 370 PVVMKAFEH 378>XP_005269721 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 PVL KAFQH Sbjct: 1187 PVLRKAFQH 1195>XP_006712619 Length = 352 Score = 20.8 bits (42), Expect = 229 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+MKAF+H Sbjct: 286 PVVMKAFEH 294>NP_001017969 Length = 2103 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 P LMKAFQ Sbjct: 823 PKLMKAFQ 830>NP_060640 Length = 312 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+++AF+H Sbjct: 83 PVIVEAFKH 91>XP_005258351 Length = 276 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+++AF+H Sbjct: 47 PVIVEAFKH 55>XP_005258350 Length = 289 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVLMKAFQH 9 PV+++AF+H Sbjct: 83 PVIVEAFKH 91>XP_006716793 Length = 1317 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 P LMKAFQ Sbjct: 37 PKLMKAFQ 44>XP_005251442 Length = 2073 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 P LMKAFQ Sbjct: 793 PKLMKAFQ 800>NP_114171 Length = 798 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 P+L+KA+ H Sbjct: 571 PLLLKAWDH 579>NP_000531 Length = 5038 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL FQH Sbjct: 3138 PVLTTLFQH 3146>NP_001036188 Length = 5033 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL FQH Sbjct: 3138 PVLTTLFQH 3146>NP_056355 Length = 1393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 PVLM+A Q Sbjct: 696 PVLMRALQ 703>XP_006723382 Length = 5027 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL FQH Sbjct: 3138 PVLTTLFQH 3146>XP_006723381 Length = 5031 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL FQH Sbjct: 3137 PVLTTLFQH 3145>XP_006723380 Length = 5032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL FQH Sbjct: 3138 PVLTTLFQH 3146>XP_006720533 Length = 1098 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 PVLM+A Q Sbjct: 401 PVLMRALQ 408>XP_006720532 Length = 1333 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 PVLM+A Q Sbjct: 636 PVLMRALQ 643>XP_005254354 Length = 1393 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 PVLM+A Q Sbjct: 696 PVLMRALQ 703>NP_065996 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 P+ +KA++H Sbjct: 74 PLFLKAWEH 82>XP_005270063 Length = 2005 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 P+ +KA++H Sbjct: 74 PLFLKAWEH 82>XP_005270062 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 P+ +KA++H Sbjct: 74 PLFLKAWEH 82>XP_005270061 Length = 3184 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PVLMKAFQH 9 P+ +KA++H Sbjct: 74 PLFLKAWEH 82>NP_001366 Length = 360 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PVLMKAFQ 8 P L KAFQ Sbjct: 331 PALWKAFQ 338>NP_008840 Length = 1237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P +MK QH Sbjct: 1041 PYIMKTSQH 1049>NP_001139 Length = 3957 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 1993 LMKAFQ 1998>NP_001121685 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL AF H Sbjct: 241 PVLACAFSH 249>NP_001121684 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL AF H Sbjct: 241 PVLACAFSH 249>XP_005248621 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P +MK QH Sbjct: 969 PYIMKTSQH 977>XP_006714729 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P +MK QH Sbjct: 1041 PYIMKTSQH 1049>XP_006714728 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P +MK QH Sbjct: 1039 PYIMKTSQH 1047>XP_006714257 Length = 4145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 2002 LMKAFQ 2007>XP_005263002 Length = 4072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 1960 LMKAFQ 1965>XP_005262999 Length = 4147 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 2004 LMKAFQ 2009>XP_006714252 Length = 4153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 2010 LMKAFQ 2015>XP_006714251 Length = 4165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 2022 LMKAFQ 2027>XP_006714250 Length = 4190 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LMKAFQ 8 LMKAFQ Sbjct: 2047 LMKAFQ 2052>XP_006712404 Length = 307 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL AF H Sbjct: 72 PVLACAFSH 80>XP_005246412 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL AF H Sbjct: 241 PVLACAFSH 249>XP_006710844 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VLMKAFQ 8 +LMKA+Q Sbjct: 50 ILMKAYQ 56>NP_689741 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PVL AF H Sbjct: 241 PVLACAFSH 249>NP_000950 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VLMKAFQ 8 +LMKA+Q Sbjct: 50 ILMKAYQ 56>NP_001034674 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VLMKAFQ 8 +LMKA+Q Sbjct: 50 ILMKAYQ 56>NP_110438 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLMKAFQH 9 VLM+ +QH Sbjct: 55 VLMERYQH 62>NP_001005237 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+K FQ+ Sbjct: 162 PFLLKRFQY 170>NP_001706 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMKAFQH 9 +MKA QH Sbjct: 287 VMKALQH 293>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+++ QH Sbjct: 4028 PTLLESIQH 4036>NP_061092 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 208 PMLLSTFSH 216>NP_001230925 Length = 4865 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L F+H Sbjct: 2999 PILTSIFEH 3007>NP_001027 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L F+H Sbjct: 2999 PILTSIFEH 3007>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PVLMKAFQ 8 P++ +AFQ Sbjct: 1618 PIVQRAFQ 1625>NP_003661 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 PV+ + F H Sbjct: 221 PVIQRTFAH 229>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+++ QH Sbjct: 3942 PTLLESIQH 3950>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+++ QH Sbjct: 3990 PTLLESIQH 3998>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+++ QH Sbjct: 3990 PTLLESIQH 3998>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 PVLMKAFQH 9 P L+++ QH Sbjct: 4023 PTLLESIQH 4031>XP_005272447 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMKAFQH 9 +MKA QH Sbjct: 216 VMKALQH 222>XP_006716315 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMKAFQH 9 +MKA QH Sbjct: 287 VMKALQH 293>XP_006716314 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMKAFQH 9 +MKA QH Sbjct: 287 VMKALQH 293>XP_006716313 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMKAFQH 9 +MKA QH Sbjct: 287 VMKALQH 293>XP_005247644 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 17 PMLLSTFSH 25>XP_005247643 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 17 PMLLSTFSH 25>XP_005247641 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 208 PMLLSTFSH 216>XP_005247640 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 208 PMLLSTFSH 216>XP_005247639 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 PVLMKAFQH 9 P+L+ F H Sbjct: 208 PMLLSTFSH 216Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.139 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,191 Number of extensions: 989 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |