Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_065769 18 1935 XP_006721134 18 1935 XP_005255507 18 1935 NP_002678 17 2528 NP_005106 17 3301 NP_059447 17 3301 NP_000532 17 4312 NP_064647 17 4312 NP_001244257 17 4312 NP_004304 17 4312 NP_001244259 17 4312 NP_001244258 17 4312 NP_004032 17 4312 NP_001135778 17 4312 XP_005274055 17 4312 XP_005274054 17 4312 XP_006718618 17 4312 XP_006718617 17 4312 XP_006718616 17 4312 XP_006718615 17 4312 XP_006714920 17 4312 XP_006714919 17 4312 XP_005246156 17 4312 NP_004303 16 5631 NP_653219 16 5631 XP_006711216 16 5631 XP_005244942 16 5631 XP_005244941 16 5631 XP_005244940 16 5631 XP_006711215 16 5631 XP_005244939 16 5631 XP_006711214 16 5631 XP_005244938 16 5631 XP_005244937 16 5631 NP_004332 16 7355 NP_004165 16 7355 NP_001271280 16 7355 NP_001193602 16 7355 NP_061760 16 7355 NP_001254505 16 7355 NP_694942 16 7355 XP_006720115 16 7355 XP_005267414 16 7355 XP_005267413 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 NP_861535 16 7355 NP_112533 15 9605 NP_002128 15 9605 NP_705838 15 9605 NP_003782 15 9605 NP_001258468 15 9605 XP_006723719 15 9605 XP_006723718 15 9605 XP_006723716 15 9605 XP_006723715 15 9605 XP_006723714 15 9605 XP_006723713 15 9605 XP_006723712 15 9605 XP_006723711 15 9605 XP_006723710 15 9605 XP_006723709 15 9605 XP_006715777 15 9605 XP_005249786 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVDSVVLTE 9 PVDSVV+TE Sbjct: 1385 PVDSVVITE 1393>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVDSVVLTE 9 PVDSVV+TE Sbjct: 1385 PVDSVVITE 1393>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVDSVVLTE 9 PVDSVV+TE Sbjct: 1385 PVDSVVITE 1393>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVDSVVLTE 9 PVDSVV+TE Sbjct: 1385 PVDSVVITE 1393>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PVDSVVLTE 9 PVDSVV+TE Sbjct: 1385 PVDSVVITE 1393>NP_065769 Length = 1352 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 P D +VLTE Sbjct: 360 PTDQIVLTE 368>XP_006721134 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 P D +VLTE Sbjct: 97 PTDQIVLTE 105>XP_005255507 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 P D +VLTE Sbjct: 97 PTDQIVLTE 105>NP_002678 Length = 717 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+SV LTE Sbjct: 531 PVESVKLTE 539>NP_005106 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+V+LTE Sbjct: 216 VDAVILTE 223>NP_059447 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+V+LTE Sbjct: 216 VDAVILTE 223>NP_000532 Length = 405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 44 PVDGVVLVD 52>NP_064647 Length = 410 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 36 PVDGVVLVD 44>NP_001244257 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 37 PVDGVVLVD 45>NP_004304 Length = 409 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 37 PVDGVVLVD 45>NP_001244259 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 37 PVDGVVLVD 45>NP_001244258 Length = 330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 37 PVDGVVLVD 45>NP_004032 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 36 PVDGVVLVD 44>NP_001135778 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 P+DSV+ TE Sbjct: 20 PLDSVIGTE 28>XP_005274055 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 40 PVDGVVLVD 48>XP_005274054 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 40 PVDGVVLVD 48>XP_006718618 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 31 PVDGVVLVD 39>XP_006718617 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 40 PVDGVVLVD 48>XP_006718616 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 36 PVDGVVLVD 44>XP_006718615 Length = 447 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 40 PVDGVVLVD 48>XP_006714920 Length = 281 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 P+DSV+ TE Sbjct: 20 PLDSVIGTE 28>XP_006714919 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 P+DSV+ TE Sbjct: 20 PLDSVIGTE 28>XP_005246156 Length = 405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VVL + Sbjct: 44 PVDGVVLVD 52>NP_004303 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 P+D VVL + Sbjct: 32 PIDGVVLVD 40>NP_653219 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 411 VDAVVVTE 418>XP_006711216 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 355 VDAVVVTE 362>XP_005244942 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 355 VDAVVVTE 362>XP_005244941 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 373 VDAVVVTE 380>XP_005244940 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 389 VDAVVVTE 396>XP_006711215 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 411 VDAVVVTE 418>XP_005244939 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 411 VDAVVVTE 418>XP_006711214 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 427 VDAVVVTE 434>XP_005244938 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 427 VDAVVVTE 434>XP_005244937 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VDSVVLTE 9 VD+VV+TE Sbjct: 427 VDAVVVTE 434>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>NP_004165 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVDSVVLT 8 P+D VVL+ Sbjct: 403 PIDQVVLS 410>NP_001271280 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PVDSVVLT 8 P+D VVL+ Sbjct: 403 PIDQVVLS 410>NP_001193602 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVDSVVL 7 PVD++VL Sbjct: 236 PVDAIVL 242>NP_061760 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PVDSVVLT 8 PV+SV++T Sbjct: 256 PVNSVIVT 263>NP_001254505 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVDSVVLTE 9 P D V+L E Sbjct: 320 PADEVILVE 328>NP_694942 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PVDSVVLTE 9 P D V+L E Sbjct: 320 PADEVILVE 328>XP_006720115 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVDSVVL 7 PVD++VL Sbjct: 159 PVDAIVL 165>XP_005267414 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVDSVVL 7 PVD++VL Sbjct: 159 PVDAIVL 165>XP_005267413 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVDSVVL 7 PVD++VL Sbjct: 129 PVDAIVL 135>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVDSVVLTE 9 PV+++ LTE Sbjct: 505 PVETIELTE 513>NP_861535 Length = 285 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVDSVVL 7 PVD++VL Sbjct: 159 PVDAIVL 165>NP_112533 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVDSVVL 7 PVD +VL Sbjct: 165 PVDKIVL 171>NP_002128 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVDSVVL 7 PVD +VL Sbjct: 153 PVDKIVL 159>NP_705838 Length = 4069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PVD VLT+ Sbjct: 1382 PVDRPVLTK 1390>NP_003782 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 P D VV+T+ Sbjct: 797 PEDGVVITQ 805>NP_001258468 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723719 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723718 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723716 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723715 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723714 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723713 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723712 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 175 PVEKVRLTE 183>XP_006723711 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723710 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006723709 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVDSVVLTE 9 PV+ V LTE Sbjct: 260 PVEKVRLTE 268>XP_006715777 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVDSVVL 7 PVD +VL Sbjct: 165 PVDKIVL 171>XP_005249786 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PVDSVVL 7 PVD +VL Sbjct: 165 PVDKIVL 171Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.130 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,144 Number of extensions: 718 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |