Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 NP_001185761 17 4312 NP_001185763 17 4312 NP_055459 17 4312 XP_006726410 17 4312 XP_006711719 17 4312 XP_006711718 17 4312 XP_006711717 17 4312 XP_006711716 17 4312 XP_006711715 17 4312 XP_006711714 17 4312 XP_006711713 17 4312 XP_006711712 17 4312 XP_006711711 17 4312 XP_006711710 17 4312 XP_006711709 17 4312 XP_005277503 17 4312 XP_005273038 17 4312 XP_006711708 17 4312 XP_005277500 17 4312 XP_006711707 17 4312 XP_005277499 17 4312 XP_006711706 17 4312 XP_006711705 17 4312 XP_006711164 17 4312 XP_006710143 17 4312 XP_006710142 17 4312 XP_006710141 17 4312 NP_001036064 16 5631 NP_005226 16 5631 XP_005246434 16 5631 XP_005246433 16 5631 XP_005246432 16 5631 XP_006712427 16 5631 NP_689862 16 7355 NP_001245308 16 7355 NP_003606 16 7355 NP_001245309 16 7355 NP_064543 16 7355 XP_005255891 16 7355 XP_005265658 16 7355 XP_005265657 16 7355 XP_005265656 16 7355 XP_005265655 16 7355 XP_006713484 16 7355 NP_001259004 15 9605 NP_005144 15 9605 NP_001265393 15 9605 NP_036192 15 9605 NP_005681 15 9605 NP_036193 15 9605 NP_001265392 15 9605 NP_001265394 15 9605 NP_543013 15 9605 NP_001787 15 9605 XP_006721395 15 9605 XP_006721394 15 9605 XP_006721393 15 9605 XP_005255817 15 9605 XP_005255816 15 9605 XP_005253340 15 9605 XP_005253339 15 9605>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 749 PVAIKVLRE 757>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 749 PVAIKVLRE 757>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 734 PVAIKVLRE 742>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 719 PVAIKVLRE 727>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 719 PVAIKVLRE 727>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV RE Sbjct: 830 PVAIKVLRE 838>NP_001185761 Length = 2240 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1520 PLALRLSRE 1528>NP_001185763 Length = 2362 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1564 PLALRLSRE 1572>NP_055459 Length = 2346 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1564 PLALRLSRE 1572>XP_006726410 Length = 2087 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1367 PLALRLSRE 1375>XP_006711719 Length = 2302 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1520 PLALRLSRE 1528>XP_006711718 Length = 1436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 571 PLALRLSRE 579>XP_006711717 Length = 2385 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1520 PLALRLSRE 1528>XP_006711716 Length = 2411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1629 PLALRLSRE 1637>XP_006711715 Length = 2428 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1563 PLALRLSRE 1571>XP_006711714 Length = 2429 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1564 PLALRLSRE 1572>XP_006711713 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1567 PLALRLSRE 1575>XP_006711712 Length = 2473 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_006711711 Length = 2482 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1617 PLALRLSRE 1625>XP_006711710 Length = 2494 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1629 PLALRLSRE 1637>XP_006711709 Length = 2495 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1630 PLALRLSRE 1638>XP_005277503 Length = 2498 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_005273038 Length = 2509 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_006711708 Length = 2512 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_005277500 Length = 2525 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_006711707 Length = 2553 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_005277499 Length = 2561 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_006711706 Length = 2591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1726 PLALRLSRE 1734>XP_006711705 Length = 2592 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1727 PLALRLSRE 1735>XP_006711164 Length = 2087 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 1367 PLALRLSRE 1375>XP_006710143 Length = 562 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 406 PLALRLSRE 414>XP_006710142 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 515 PLALRLSRE 523>XP_006710141 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PVAIKVSRE 9 P+A+++SRE Sbjct: 516 PLALRLSRE 524>NP_001036064 Length = 1292 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 747 PVAIKILNE 755>NP_005226 Length = 1308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 747 PVAIKILNE 755>XP_005246434 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 737 PVAIKILNE 745>XP_005246433 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 737 PVAIKILNE 745>XP_005246432 Length = 1307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 762 PVAIKILNE 770>XP_006712427 Length = 1323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 PVAIK+ E Sbjct: 762 PVAIKILNE 770>NP_689862 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV ++ Sbjct: 226 PVAIKVFKK 234>NP_001245308 Length = 1131 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1109 PVSVKISFE 1117>NP_003606 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1192 PVSVKISFE 1200>NP_001245309 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1068 PVSVKISFE 1076>NP_064543 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PVAIKVSRE 9 P +KVS+E Sbjct: 61 PAEVKVSKE 69>XP_005255891 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PVAIKV ++ Sbjct: 226 PVAIKVFKK 234>XP_005265658 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1073 PVSVKISFE 1081>XP_005265657 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1091 PVSVKISFE 1099>XP_005265656 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1096 PVSVKISFE 1104>XP_005265655 Length = 1126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1104 PVSVKISFE 1112>XP_006713484 Length = 1255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PVAIKVSRE 9 PV++K+S E Sbjct: 1233 PVSVKISFE 1241>NP_001259004 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKVS 7 PVAIK++ Sbjct: 395 PVAIKIA 401>NP_005144 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKVS 7 PVAIK++ Sbjct: 391 PVAIKIA 397>NP_001265393 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 209 ALKISRE 215>NP_036192 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 196 ALKISRE 202>NP_005681 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 196 ALKISRE 202>NP_036193 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 196 ALKISRE 202>NP_001265392 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 196 ALKISRE 202>NP_001265394 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 209 ALKISRE 215>NP_543013 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PVAIKV 6 PVAIKV Sbjct: 254 PVAIKV 259>NP_001787 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PVAIKV 6 PVAIKV Sbjct: 481 PVAIKV 486>XP_006721395 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKVS 7 PVAIK++ Sbjct: 195 PVAIKIA 201>XP_006721394 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKVS 7 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_006721393 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PVAIKVS 7 PVAIK++ Sbjct: 396 PVAIKIA 402>XP_005255817 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PVAIKV 6 PVAIKV Sbjct: 481 PVAIKV 486>XP_005255816 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PVAIKV 6 PVAIKV Sbjct: 481 PVAIKV 486>XP_005253340 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 47 ALKISRE 53>XP_005253339 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIKVSRE 9 A+K+SRE Sbjct: 209 ALKISRE 215Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.128 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,597 Number of extensions: 713 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |