Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_073713 20 509 NP_001007526 17 2528 NP_542452 17 4312 XP_006724409 17 4312 XP_005261851 17 4312 XP_005261850 17 4312 NP_001138678 17 4312 NP_055068 16 5631 NP_001156750 16 5631 NP_000912 16 5631 NP_001156751 16 5631 NP_116126 16 5631 NP_001190991 16 5631 NP_036203 16 5631 XP_006724788 16 5631 XP_006719149 16 5631 NP_000238 16 7355 NP_001170990 16 7355 NP_056083 16 7355 NP_892121 16 7355 NP_056311 16 7355 XP_005247302 16 7355 NP_006574 16 7355 NP_036520 15 9605 NP_001157413 15 9605 NP_001164223 15 9605 NP_001073990 15 9605 NP_001265281 15 9605 NP_001269385 15 9605 NP_848654 15 9605 NP_775105 15 9605 NP_001036148 15 9605 NP_116182 15 9605 NP_001129965 15 9605 NP_001274738 15 9605 NP_001274737 15 9605 NP_078888 15 9605 XP_006722146 15 9605 XP_005266479 15 9605 XP_005251533 15 9605 XP_006716840 15 9605 XP_006715506 15 9605 XP_006715505 15 9605 XP_006715504 15 9605 XP_006715503 15 9605 XP_006715502 15 9605 XP_005271342 15 9605 NP_068750 15 9605 NP_002188 15 9605>NP_073713 Length = 985 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PTYLLQAGV 9 PTY LQAGV Sbjct: 453 PTYPLQAGV 461>NP_001007526 Length = 1432 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PTYLLQA 7 PTY+LQA Sbjct: 117 PTYVLQA 123>NP_542452 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PTYLLQA 7 PT+LLQA Sbjct: 280 PTWLLQA 286>XP_006724409 Length = 1806 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TY LQAG Sbjct: 31 TYFLQAG 37>XP_005261851 Length = 1806 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TY LQAG Sbjct: 31 TYFLQAG 37>XP_005261850 Length = 1806 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TY LQAG Sbjct: 31 TYFLQAG 37>NP_001138678 Length = 1806 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TY LQAG Sbjct: 31 TYFLQAG 37>NP_055068 Length = 2725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+LL AGV Sbjct: 671 TFLLDAGV 678>NP_001156750 Length = 2732 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+LL AGV Sbjct: 671 TFLLDAGV 678>NP_000912 Length = 1141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AGV Sbjct: 149 YLLRAGV 155>NP_001156751 Length = 2731 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+LL AGV Sbjct: 670 TFLLDAGV 677>NP_116126 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PTYLLQAG 8 P Y+L+AG Sbjct: 519 PKYILRAG 526>NP_001190991 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TYLLQAG 8 TY+L+AG Sbjct: 68 TYILEAG 74>NP_036203 Length = 195 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TYLLQAG 8 TY+L+AG Sbjct: 68 TYILEAG 74>XP_006724788 Length = 2570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+LL AGV Sbjct: 517 TFLLDAGV 524>XP_006719149 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AGV Sbjct: 149 YLLRAGV 155>NP_000238 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PTYLLQAGV 9 P +LL AG+ Sbjct: 5 PVFLLLAGI 13>NP_001170990 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PTYLLQAGV 9 P +LL AG+ Sbjct: 5 PVFLLLAGI 13>NP_056083 Length = 2243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+L QAG+ Sbjct: 1536 THLFQAGI 1543>NP_892121 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T LLQAGV Sbjct: 475 TGLLQAGV 482>NP_056311 Length = 1812 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T LLQAGV Sbjct: 475 TGLLQAGV 482>XP_005247302 Length = 2248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 T+L QAG+ Sbjct: 1541 THLFQAGI 1548>NP_006574 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 TYL+ AG+ Sbjct: 30 TYLIMAGM 37>NP_036520 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PTYLLQAG 8 P Y L+AG Sbjct: 16 PPYCLEAG 23>NP_001157413 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YLLQAG 8 YL+QAG Sbjct: 942 YLIQAG 947>NP_001164223 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PTYLLQAG 8 PT LLQ G Sbjct: 369 PTLLLQYG 376>NP_001073990 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYLLQAGV 9 TYL+ AG+ Sbjct: 276 TYLVGAGI 283>NP_001265281 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TYL+Q G Sbjct: 318 TYLVQTG 324>NP_001269385 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PTYLLQAGV 9 P Y+ QAG+ Sbjct: 131 PHYVAQAGL 139>NP_848654 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YLLQAG 8 YL+QAG Sbjct: 497 YLIQAG 502>NP_775105 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>NP_001036148 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>NP_116182 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YLLQAGV 9 YLL AGV Sbjct: 242 YLLAAGV 248>NP_001129965 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YLLQAGV 9 YLL AGV Sbjct: 255 YLLAAGV 261>NP_001274738 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YLLQAGV 9 YLL AGV Sbjct: 203 YLLAAGV 209>NP_001274737 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YLLQAGV 9 YLL AGV Sbjct: 86 YLLAAGV 92>NP_078888 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PTYLLQAG 8 P YL +AG Sbjct: 87 PKYLYEAG 94>XP_006722146 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PTYLLQAG 8 P YL +AG Sbjct: 87 PKYLYEAG 94>XP_005266479 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PTYLLQ 6 P+YLLQ Sbjct: 3 PSYLLQ 8>XP_005251533 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TYL+Q G Sbjct: 318 TYLVQTG 324>XP_006716840 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TYL+Q G Sbjct: 326 TYLVQTG 332>XP_006715506 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>XP_006715505 Length = 1673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>XP_006715504 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>XP_006715503 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>XP_006715502 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLLQAGV 9 YLL+AG+ Sbjct: 215 YLLEAGL 221>XP_005271342 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YLLQAGV 9 YLL AGV Sbjct: 240 YLLAAGV 246>NP_068750 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PTYLLQAG 8 P YL +AG Sbjct: 88 PQYLAEAG 95>NP_002188 Length = 889 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TYLLQAG 8 TYL+Q G Sbjct: 318 TYLVQTG 324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.141 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 523,817 Number of extensions: 1109 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |