Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066124 20 390 XP_006717999 20 390 NP_002408 18 1482 NP_001139438 18 1482 XP_006717927 18 1482 XP_006711326 17 3301 XP_005273145 17 3301 XP_006711325 17 3301 NP_066018 17 4312 XP_005260531 17 4312 NP_055730 16 5631 NP_001242982 16 5631 NP_002877 16 5631 NP_001043 16 5631 NP_067006 16 5631 NP_001258115 16 5631 XP_006717495 16 5631 XP_006717492 16 5631 XP_006717491 16 5631 XP_006717489 16 5631 XP_006717488 16 5631 XP_006717487 16 5631 XP_006717486 16 5631 XP_006710290 16 5631 NP_066361 16 5631 NP_000066 16 7355 NP_001789 15 9605 NP_439892 15 9605 NP_001181926 15 9605 NP_001014437 15 9605 NP_065128 15 9605 NP_001742 15 9605 NP_001135943 15 9605 NP_644802 15 9605 NP_835224 15 9605 NP_001191031 15 9605 NP_001191030 15 9605 NP_001076442 15 9605 NP_001076441 15 9605 NP_001258594 15 9605 NP_060742 15 9605 NP_775901 15 9605 NP_055535 15 9605 NP_005966 15 9605 XP_006725193 15 9605 XP_006725192 15 9605 XP_005266736 15 9605 XP_006722498 15 9605 XP_006722497 15 9605 XP_006719165 15 9605 XP_005253468 15 9605 XP_006719164 15 9605 XP_005253464 15 9605 XP_006719163 15 9605 XP_005253463 15 9605 XP_006718404 15 9605 XP_006718403 15 9605 XP_005270358 15 9605 XP_005263206 15 9605 XP_005263205 15 9605 XP_005247001 15 9605 NP_849150 15 9605>NP_066124 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PS AKLMDT Sbjct: 1103 PSAAKLMDT 1111>XP_006717999 Length = 1207 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PS AKLMDT Sbjct: 1196 PSAAKLMDT 1204>NP_002408 Length = 3256 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV K MDT Sbjct: 2260 PSVGKAMDT 2268Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS K MDT Sbjct: 2381 PSAGKAMDT 2389>NP_001139438 Length = 2896 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV K MDT Sbjct: 1900 PSVGKAMDT 1908Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS K MDT Sbjct: 2021 PSAGKAMDT 2029>XP_006717927 Length = 2406 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV K MDT Sbjct: 1410 PSVGKAMDT 1418Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS K MDT Sbjct: 1531 PSAGKAMDT 1539>XP_006711326 Length = 694 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV+ L+DT Sbjct: 12 PSVSSLVDT 20>XP_005273145 Length = 845 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV+ L+DT Sbjct: 12 PSVSSLVDT 20>XP_006711325 Length = 864 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV+ L+DT Sbjct: 12 PSVSSLVDT 20>NP_066018 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV K +DT Sbjct: 538 PSVQKALDT 546>XP_005260531 Length = 474 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV K +DT Sbjct: 433 PSVQKALDT 441>NP_055730 Length = 1710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>NP_001242982 Length = 1709 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>NP_002877 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV +++DT Sbjct: 50 PSVLEILDT 58>NP_001043 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PSVAKLMD 8 PSVAKL++ Sbjct: 160 PSVAKLIN 167>NP_067006 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV +++DT Sbjct: 50 PSVLEILDT 58>NP_001258115 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV +++DT Sbjct: 50 PSVLEILDT 58>XP_006717495 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717492 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717491 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717489 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717488 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717487 Length = 2071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006717486 Length = 2072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSVAKLM 7 PS+AKLM Sbjct: 276 PSLAKLM 282>XP_006710290 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SVAKLMD 8 SVAK+MD Sbjct: 502 SVAKMMD 508>NP_066361 Length = 183 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSV +++DT Sbjct: 50 PSVLEILDT 58>NP_000066 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V +LMD Sbjct: 69 PNVVRLMD 76>NP_001789 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P++ KL+D Sbjct: 61 PNIVKLLD 68>NP_439892 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P++ KL+D Sbjct: 61 PNIVKLLD 68>NP_001181926 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 719 PTVVKLVD 726>NP_001014437 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 719 PTVVKLVD 726>NP_065128 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS AKL T Sbjct: 305 PSTAKLSST 313>NP_001742 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 636 PTVVKLVD 643>NP_001135943 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS AKL T Sbjct: 305 PSTAKLSST 313>NP_644802 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 636 PTVVKLVD 643>NP_835224 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 P V KL+D+ Sbjct: 245 PQVMKLLDS 253>NP_001191031 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 67 PSVAQEMNT 75>NP_001191030 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 48 PSVAQEMNT 56>NP_001076442 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 107 PSVAQEMNT 115>NP_001076441 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 171 PSVAQEMNT 179>NP_001258594 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P++ K+MD Sbjct: 181 PTILKMMD 188>NP_060742 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 113 PSVAQEMNT 121>NP_775901 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+VA L+D Sbjct: 1822 PTVASLLD 1829>NP_055535 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P++ KL+D Sbjct: 89 PNIVKLLD 96>NP_005966 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 PSV KLM T Sbjct: 414 PSVHKLMLT 422>XP_006725193 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 626 PTVVKLVD 633>XP_006725192 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 719 PTVVKLVD 726>XP_005266736 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+VA L+D Sbjct: 910 PTVASLLD 917>XP_006722498 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+VA L+D Sbjct: 1823 PTVASLLD 1830>XP_006722497 Length = 2227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+VA L+D Sbjct: 1823 PTVASLLD 1830>XP_006719165 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 107 PSVAQEMNT 115>XP_005253468 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 67 PSVAQEMNT 75>XP_006719164 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 171 PSVAQEMNT 179>XP_005253464 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 67 PSVAQEMNT 75>XP_006719163 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 81 PSVAQEMNT 89>XP_005253463 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PSVAKLMDT 9 PSVA+ M+T Sbjct: 171 PSVAQEMNT 179>XP_006718404 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 626 PTVVKLVD 633>XP_006718403 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P+V KL+D Sbjct: 719 PTVVKLVD 726>XP_005270358 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PSVAKLMD 8 P++ KL+D Sbjct: 89 PNIVKLLD 96>XP_005263206 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS AKL T Sbjct: 305 PSTAKLSST 313>XP_005263205 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSVAKLMDT 9 PS AKL T Sbjct: 305 PSTAKLSST 313>XP_005247001 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 P V KL+D+ Sbjct: 245 PQVMKLLDS 253>NP_849150 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSVAKLMDT 9 P V KL++T Sbjct: 359 PDVQKLLET 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.121 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,388 Number of extensions: 810 Number of successful extensions: 65 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |