Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 20 509 XP_005268094 20 509 NP_001070254 17 2528 XP_006718388 17 2528 XP_006718387 17 2528 XP_006718386 17 2528 NP_003731 17 3301 XP_006715298 17 3301 XP_005249513 17 3301 XP_005256084 16 5631 XP_005256083 16 5631 XP_005256082 16 5631 NP_060766 16 5631 NP_000209 16 7355 NP_861463 16 7355 NP_115582 16 7355 NP_001018088 16 7355 NP_004948 16 7355 NP_001275732 16 7355 NP_001092268 16 7355 NP_001092267 16 7355 NP_001092266 16 7355 NP_005759 16 7355 NP_065961 16 7355 NP_001158137 16 7355 XP_005260643 16 7355 XP_006723947 16 7355 XP_006721363 16 7355 XP_005256258 16 7355 XP_005256257 16 7355 XP_005256256 16 7355 XP_005256255 16 7355 XP_006721362 16 7355 XP_006721361 16 7355 XP_005256254 16 7355 XP_005256253 16 7355 XP_005256252 16 7355 XP_005256251 16 7355 XP_006721360 16 7355 XP_005256250 16 7355 XP_005251921 16 7355 XP_006716134 16 7355 NP_116272 16 7355 NP_055661 15 9605 NP_001171761 15 9605 NP_000329 15 9605 NP_001012241 15 9605 NP_001073981 15 9605 XP_005257356 15 9605 XP_005257355 15 9605 XP_006720719 15 9605 XP_005254663 15 9605 XP_005254662 15 9605 XP_005270226 15 9605 XP_005270225 15 9605 XP_005270224 15 9605 XP_005270223 15 9605 XP_005251177 15 9605>NP_000360 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSLLEVSQT 9 PSLL+VSQT Sbjct: 228 PSLLDVSQT 236>XP_005268094 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PSLLEVSQT 9 PSLL+VSQT Sbjct: 228 PSLLDVSQT 236>NP_001070254 Length = 1735 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 PSLL VSQ+ Sbjct: 333 PSLLSVSQS 341>XP_006718388 Length = 1331 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 PSLL VSQ+ Sbjct: 396 PSLLSVSQS 404>XP_006718387 Length = 1798 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 PSLL VSQ+ Sbjct: 396 PSLLSVSQS 404>XP_006718386 Length = 1822 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 PSLL VSQ+ Sbjct: 396 PSLLSVSQS 404>NP_003731 Length = 499 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 P+L EVSQT Sbjct: 353 PTLEEVSQT 361>XP_006715298 Length = 317 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 P+L EVSQT Sbjct: 171 PTLEEVSQT 179>XP_005249513 Length = 496 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PSLLEVSQT 9 P+L EVSQT Sbjct: 350 PTLEEVSQT 358>XP_005256084 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PSLLEVSQ 8 PSL+EVS+ Sbjct: 85 PSLVEVSR 92>XP_005256083 Length = 607 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PSLLEVSQ 8 PSL+EVS+ Sbjct: 85 PSLVEVSR 92>XP_005256082 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PSLLEVSQ 8 PSL+EVS+ Sbjct: 85 PSLVEVSR 92>NP_060766 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PSLLEVSQ 8 PSL+EVS+ Sbjct: 85 PSLVEVSR 92>NP_000209 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSLLEVS 7 P+LLEVS Sbjct: 469 PTLLEVS 475>NP_861463 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSLLEVS 7 P+LLEVS Sbjct: 342 PTLLEVS 348>NP_115582 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>NP_001018088 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 P+L EVS T Sbjct: 390 PNLTEVSST 398>NP_004948 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 P+L EVS T Sbjct: 440 PNLTEVSST 448>NP_001275732 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 P+L EVS T Sbjct: 414 PNLTEVSST 422>NP_001092268 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 57 PELLSTSQT 65>NP_001092267 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 48 PELLSTSQT 56>NP_001092266 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 6 PELLSTSQT 14>NP_005759 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PSLLEVS 7 PSLLEV+ Sbjct: 182 PSLLEVA 188>NP_065961 Length = 1934 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSL EVSQ Sbjct: 302 PSLGEVSQ 309>NP_001158137 Length = 1950 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSL EVSQ Sbjct: 302 PSLGEVSQ 309>XP_005260643 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 57 PELLSTSQT 65>XP_006723947 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 57 PELLSTSQT 65>XP_006721363 Length = 1385 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256258 Length = 1397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1136 SLLQLSQT 1143>XP_005256257 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256256 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256255 Length = 1809 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_006721362 Length = 1810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_006721361 Length = 1836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1136 SLLQLSQT 1143>XP_005256254 Length = 1837 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256253 Length = 1838 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1138 SLLQLSQT 1145>XP_005256252 Length = 1865 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256251 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_006721360 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005256250 Length = 1866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLLEVSQT 9 SLL++SQT Sbjct: 1166 SLLQLSQT 1173>XP_005251921 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 P+L EVS T Sbjct: 440 PNLTEVSST 448>XP_006716134 Length = 1847 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSL EVSQ Sbjct: 226 PSLGEVSQ 233>NP_116272 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P LL SQT Sbjct: 6 PELLSTSQT 14>NP_055661 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PSLLEVSQ 8 P LL VSQ Sbjct: 606 PDLLSVSQ 613>NP_001171761 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSLLE+ + Sbjct: 129 PSLLEIHE 136>NP_000329 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSLLE+ + Sbjct: 129 PSLLEIHE 136>NP_001012241 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P L E SQT Sbjct: 43 PELSETSQT 51>NP_001073981 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 PS+ +SQT Sbjct: 226 PSIQHISQT 234>XP_005257356 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P L E SQT Sbjct: 306 PELSETSQT 314>XP_005257355 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PSLLEVSQT 9 P L E SQT Sbjct: 306 PELSETSQT 314>XP_006720719 Length = 1097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSLLE+ + Sbjct: 129 PSLLEIHE 136>XP_005254663 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSLLE+ + Sbjct: 129 PSLLEIHE 136>XP_005254662 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSLLEVSQ 8 PSLLE+ + Sbjct: 129 PSLLEIHE 136>XP_005270226 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 PS+ +SQT Sbjct: 179 PSIQHISQT 187>XP_005270225 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 PS+ +SQT Sbjct: 226 PSIQHISQT 234>XP_005270224 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 PS+ +SQT Sbjct: 226 PSIQHISQT 234>XP_005270223 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSLLEVSQT 9 PS+ +SQT Sbjct: 226 PSIQHISQT 234>XP_005251177 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PSLLEVSQ 8 P LL VSQ Sbjct: 458 PDLLSVSQ 465Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.117 0.284 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,787 Number of extensions: 677 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |