Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1935 NP_003740 17 4312 NP_689963 17 4312 XP_005250282 17 4312 XP_006715969 17 4312 XP_006715968 17 4312 XP_005250281 17 4312 XP_005250280 17 4312 NP_001006608 16 5631 NP_955372 16 5631 NP_055649 16 5631 XP_005275724 16 5631 XP_005275722 16 5631 XP_005275721 16 5631 XP_006725345 16 5631 XP_006725344 16 5631 XP_005275719 16 5631 XP_006725343 16 5631 XP_006725342 16 5631 XP_005275717 16 5631 XP_005275716 16 5631 XP_005257941 16 5631 XP_005257940 16 5631 XP_006722274 16 5631 XP_006722273 16 5631 XP_005257939 16 5631 XP_006722272 16 5631 XP_005257937 16 5631 XP_005257936 16 5631 XP_005257935 16 5631 XP_006722271 16 5631 NP_001171655 16 7355 NP_000346 16 7355 NP_005090 15 9605 NP_001138817 15 9605 NP_848611 15 9605 NP_001017922 15 9605 NP_061008 15 9605 NP_001138816 15 9605 NP_116227 15 9605 NP_001138815 15 9605 XP_005259413 15 9605 XP_006723511 15 9605 XP_005259411 15 9605 XP_006723510 15 9605 XP_006712361 15 9605 XP_005246377 15 9605 XP_006710376 15 9605 XP_005270472 15 9605>NP_004110 Length = 993 Score = 17.7 bits (34), Expect = 1935 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SITLQVLV 9 SITLQVLV Sbjct: 88 SITLQVLV 95>NP_003740 Length = 1338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+TLQ++ Sbjct: 236 PSVTLQLM 243>NP_689963 Length = 885 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 309 PTISLEVLV 317>XP_005250282 Length = 693 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 309 PTISLEVLV 317>XP_006715969 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 127 PTISLEVLV 135>XP_006715968 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 309 PTISLEVLV 317>XP_005250281 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 221 PTISLEVLV 229>XP_005250280 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 PSITLQVLV 9 P+I+L+VLV Sbjct: 221 PTISLEVLV 229>NP_001006608 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>NP_955372 Length = 1634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>NP_055649 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005275724 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005275722 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005275721 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006725345 Length = 1600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006725344 Length = 1606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 510 PSVTVQLL 517>XP_005275719 Length = 1625 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006725343 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006725342 Length = 1651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005275717 Length = 1665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005275716 Length = 1676 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257941 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257940 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006722274 Length = 1576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006722273 Length = 1600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257939 Length = 1606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 510 PSVTVQLL 517>XP_006722272 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257937 Length = 1651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257936 Length = 1665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_005257935 Length = 1676 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>XP_006722271 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PSITLQVL 8 PS+T+Q+L Sbjct: 604 PSVTVQLL 611>NP_001171655 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQVL Sbjct: 304 SVTLQVL 310>NP_000346 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQVL Sbjct: 331 SVTLQVL 337>NP_005090 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ITLQVLV 9 +TLQVLV Sbjct: 781 LTLQVLV 787>NP_001138817 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 156 PSFTLQQII 164>NP_848611 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PSITLQVL 8 P+I LQ+L Sbjct: 423 PAIVLQIL 430>NP_001017922 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQ+L Sbjct: 108 SVTLQIL 114>NP_061008 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQ+L Sbjct: 108 SVTLQIL 114>NP_001138816 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 156 PSFTLQQII 164>NP_116227 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 156 PSFTLQQII 164>NP_001138815 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 157 PSFTLQQII 165>XP_005259413 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 52 PSFTLQQII 60>XP_006723511 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 52 PSFTLQQII 60>XP_005259411 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 124 PSFTLQQII 132>XP_006723510 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PSITLQVLV 9 PS TLQ ++ Sbjct: 157 PSFTLQQII 165>XP_006712361 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITLQVLV 9 +TLQ+LV Sbjct: 11 VTLQILV 17>XP_005246377 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITLQVLV 9 +TLQ+LV Sbjct: 11 VTLQILV 17>XP_006710376 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQ+L Sbjct: 108 SVTLQIL 114>XP_005270472 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SITLQVL 8 S+TLQ+L Sbjct: 169 SVTLQIL 175Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.139 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 390,183 Number of extensions: 552 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |