Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 19 869 XP_005273257 19 869 NP_001073960 17 3301 NP_055503 17 3301 XP_006717605 17 3301 NP_663306 17 4312 NP_003179 17 4312 NP_663304 17 4312 NP_663305 17 4312 NP_001191009 17 4312 NP_001190994 17 4312 NP_001190999 17 4312 NP_001190998 17 4312 NP_858056 17 4312 XP_005269089 17 4312 XP_006719575 17 4312 XP_006719574 17 4312 XP_005269086 17 4312 XP_005269085 17 4312 XP_006719567 17 4312 XP_006715616 17 4312 NP_055736 16 5631 NP_001008701 16 5631 XP_006722753 16 5631 XP_005259876 16 5631 XP_006722752 16 5631 XP_005259875 16 5631 XP_006722751 16 5631 XP_005250366 16 5631 NP_000055 16 7355 NP_008982 16 7355 NP_115622 16 7355 XP_006726853 16 7355 XP_006723596 16 7355 NP_003126 15 9605 NP_001269569 15 9605 NP_001269572 15 9605 NP_071931 15 9605 NP_612510 15 9605 NP_001191123 15 9605 NP_037460 15 9605 NP_004710 15 9605 NP_001258610 15 9605 NP_777613 15 9605 NP_777617 15 9605 NP_777614 15 9605 NP_005164 15 9605 NP_777618 15 9605 NP_777615 15 9605 NP_001258652 15 9605 NP_110420 15 9605 XP_006723010 15 9605 XP_006723009 15 9605 XP_006723008 15 9605 XP_005256713 15 9605 XP_006719755 15 9605 XP_005269287 15 9605 XP_005269061 15 9605 XP_006714860 15 9605 XP_006714859 15 9605 XP_005268570 15 9605 XP_006710833 15 9605 XP_006710832 15 9605 NP_061174 15 9605 NP_777616 15 9605>NP_064450 Length = 1722 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PRR SVQLD Sbjct: 791 PRRISVQLD 799>XP_005273257 Length = 1726 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PRR SVQLD Sbjct: 795 PRRISVQLD 803>NP_001073960 Length = 845 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRRKSV+ Sbjct: 448 PRRKSVE 454>NP_055503 Length = 828 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRRKSV+ Sbjct: 431 PRRKSVE 437>XP_006717605 Length = 856 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRRKSV+ Sbjct: 459 PRRKSVE 465>NP_663306 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRR+S+Q Sbjct: 408 PRRRSIQ 414>NP_003179 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRR+S+Q Sbjct: 408 PRRRSIQ 414>NP_663304 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRR+S+Q Sbjct: 435 PRRRSIQ 441>NP_663305 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRR+S+Q Sbjct: 435 PRRRSIQ 441>NP_001191009 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 227 RKSVQID 233>NP_001190994 Length = 290 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 251 RKSVQID 257>NP_001190999 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 387 RKSVQID 393>NP_001190998 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 411 RKSVQID 417>NP_858056 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 471 RKSVQID 477>XP_005269089 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 227 RKSVQID 233>XP_006719575 Length = 1200 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 1161 RKSVQID 1167>XP_006719574 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 1185 RKSVQID 1191>XP_005269086 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 1217 RKSVQID 1223>XP_005269085 Length = 1260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 1221 RKSVQID 1227>XP_006719567 Length = 1284 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKSVQLD 9 RKSVQ+D Sbjct: 1245 RKSVQID 1251>XP_006715616 Length = 476 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PRR+S+Q Sbjct: 305 PRRRSIQ 311>NP_055736 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 698 PRKNSIQL 705>NP_001008701 Length = 1474 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 703 PRKNSIQL 710>XP_006722753 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 703 PRKNSIQL 710>XP_005259876 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 703 PRKNSIQL 710>XP_006722752 Length = 1462 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 667 PRKNSIQL 674>XP_005259875 Length = 1493 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 698 PRKNSIQL 705>XP_006722751 Length = 1498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+ S+QL Sbjct: 703 PRKNSIQL 710>XP_005250366 Length = 344 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PRRKS+ + Sbjct: 333 PRRKSITI 340>NP_000055 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRKSVQL 8 RR+SVQL Sbjct: 669 RRRSVQL 675>NP_008982 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PRRKSVQLD 9 PRR QLD Sbjct: 620 PRRDVTQLD 628>NP_115622 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PR+KSV + Sbjct: 59 PRKKSVNM 66>XP_006726853 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PRRKSVQLD 9 PR+KS+ D Sbjct: 122 PRKKSISED 130>XP_006723596 Length = 707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PRRKSVQLD 9 PR+KS+ D Sbjct: 122 PRKKSISED 130>NP_003126 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 P RKSV L Sbjct: 99 PSRKSVML 106>NP_001269569 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 P+R SVQ+ Sbjct: 477 PKRHSVQI 484>NP_001269572 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 P+R SVQ+ Sbjct: 477 PKRHSVQI 484>NP_071931 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 P+R SVQ+ Sbjct: 477 PKRHSVQI 484>NP_612510 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 P R+S++LD Sbjct: 45 PARQSLRLD 53>NP_001191123 Length = 120 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 P RKSV L Sbjct: 75 PSRKSVML 82>NP_037460 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PRR ++QL Sbjct: 198 PRRLAIQL 205>NP_004710 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 P+RKSV+ Sbjct: 372 PKRKSVR 378>NP_001258610 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PRRKSVQL 8 PRR ++QL Sbjct: 124 PRRLAIQL 131>NP_777613 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_777617 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_777614 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_005164 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_777618 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_777615 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>NP_001258652 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PR+KSV+ Sbjct: 3 PRKKSVK 9>NP_110420 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PR+KSV+ Sbjct: 3 PRKKSVK 9>XP_006723010 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 P R+S++LD Sbjct: 60 PARQSLRLD 68>XP_006723009 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 P R+S++LD Sbjct: 77 PARQSLRLD 85>XP_006723008 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 P R+S++LD Sbjct: 78 PARQSLRLD 86>XP_005256713 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579>XP_006719755 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 P+RKSV+ Sbjct: 327 PKRKSVR 333>XP_005269287 Length = 1527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 P+RKSV+ Sbjct: 436 PKRKSVR 442>XP_005269061 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 PR KSV L Sbjct: 190 PREKSVTL 197>XP_006714860 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PR+KSV+ Sbjct: 3 PRKKSVK 9>XP_006714859 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PR+KSV+ Sbjct: 3 PRKKSVK 9>XP_005268570 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PRRKSVQ 7 PR+KSV+ Sbjct: 3 PRKKSVK 9>XP_006710833 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 PR KSV L Sbjct: 374 PREKSVAL 381>XP_006710832 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 PR KSV L Sbjct: 374 PREKSVAL 381>NP_061174 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PRRKSVQL 8 PR KSV L Sbjct: 374 PREKSVAL 381>NP_777616 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PRRKSVQLD 9 PR++ ++LD Sbjct: 571 PRKEDMELD 579Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.133 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,433 Number of extensions: 973 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |