Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 20 299 NP_733762 18 1935 XP_006713860 18 1935 XP_006713859 18 1935 XP_005247910 18 1935 XP_005247909 18 1935 NP_001273560 16 5631 NP_004450 16 5631 NP_872579 16 5631 XP_005257218 16 5631 XP_005257217 16 5631 XP_005257216 16 5631 XP_005257215 16 5631 XP_005257214 16 5631 XP_005257213 16 5631 XP_005257212 16 5631 XP_006721834 16 5631 XP_005257211 16 5631 XP_005257210 16 5631 XP_005257209 16 5631 XP_005257208 16 5631 XP_006721833 16 5631 XP_005257207 16 5631 XP_006719923 16 5631 XP_006719922 16 5631 XP_006719920 16 5631 XP_005266554 16 5631 XP_005266553 16 5631 XP_006719919 16 5631 XP_005266551 16 5631 XP_005266550 16 5631 XP_005266549 16 5631 XP_006719918 16 5631 XP_005266548 16 5631 XP_005270828 16 5631 NP_000294 16 7355 XP_005255429 16 7355 XP_005267366 16 7355 XP_006720083 16 7355 XP_006720082 16 7355 XP_006712555 16 7355 XP_006712554 16 7355 XP_005263717 16 7355 XP_005263716 16 7355 XP_006712553 16 7355 NP_694591 16 7355 NP_997246 16 7355 NP_619542 15 9605 NP_001273484 15 9605 NP_001273759 15 9605 NP_079040 15 9605 NP_064570 15 9605 XP_005274600 15 9605>NP_005179 Length = 906 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PRQNLTKLS 9 PR+NLTKLS Sbjct: 147 PRRNLTKLS 155>NP_733762 Length = 982 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RQNLTKLS 9 R+NLTKLS Sbjct: 140 RRNLTKLS 147>XP_006713860 Length = 914 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RQNLTKLS 9 R+NLTKLS Sbjct: 168 RRNLTKLS 175>XP_006713859 Length = 966 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RQNLTKLS 9 R+NLTKLS Sbjct: 168 RRNLTKLS 175>XP_005247910 Length = 982 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RQNLTKLS 9 R+NLTKLS Sbjct: 140 RRNLTKLS 147>XP_005247909 Length = 1010 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 RQNLTKLS 9 R+NLTKLS Sbjct: 168 RRNLTKLS 175>NP_001273560 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 664 QNVTKLS 670>NP_004450 Length = 2903 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2588 KQNATKLS 2595>NP_872579 Length = 2920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2605 KQNATKLS 2612>XP_005257218 Length = 2957 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2642 KQNATKLS 2649>XP_005257217 Length = 2961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2588 KQNATKLS 2595>XP_005257216 Length = 3015 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2642 KQNATKLS 2649>XP_005257215 Length = 3032 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2659 KQNATKLS 2666>XP_005257214 Length = 3094 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2721 KQNATKLS 2728>XP_005257213 Length = 3095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2722 KQNATKLS 2729>XP_005257212 Length = 3095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2722 KQNATKLS 2729>XP_006721834 Length = 3100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257211 Length = 3100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257210 Length = 3104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2731 KQNATKLS 2738>XP_005257209 Length = 3148 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257208 Length = 3157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2784 KQNATKLS 2791>XP_006721833 Length = 3158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_005257207 Length = 3158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQNLTKLS 9 +QN TKLS Sbjct: 2785 KQNATKLS 2792>XP_006719923 Length = 734 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 389 QNVTKLS 395>XP_006719922 Length = 942 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 677 QNVTKLS 683>XP_006719920 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 677 QNVTKLS 683>XP_005266554 Length = 1000 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 677 QNVTKLS 683>XP_005266553 Length = 1007 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 662 QNVTKLS 668>XP_006719919 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 664 QNVTKLS 670>XP_005266551 Length = 1012 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 667 QNVTKLS 673>XP_005266550 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 672 QNVTKLS 678>XP_005266549 Length = 1019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 674 QNVTKLS 680>XP_006719918 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 676 QNVTKLS 682>XP_005266548 Length = 1022 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QN+TKLS Sbjct: 677 QNVTKLS 683>XP_005270828 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PRQNLTKLS 9 PR LT+LS Sbjct: 125 PRPRLTRLS 133>NP_000294 Length = 246 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PRQNLTK 7 PRQ +TK Sbjct: 20 PRQKITK 26>XP_005255429 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PRQNLTK 7 PRQ +TK Sbjct: 20 PRQKITK 26>XP_005267366 Length = 1330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PRQNLTKLS 9 PR +L KLS Sbjct: 109 PRPSLAKLS 117>XP_006720083 Length = 1355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PRQNLTKLS 9 PR +L KLS Sbjct: 109 PRPSLAKLS 117>XP_006720082 Length = 1363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PRQNLTKLS 9 PR +L KLS Sbjct: 109 PRPSLAKLS 117>XP_006712555 Length = 1786 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 630 KQNLTKI 636>XP_006712554 Length = 1885 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 729 KQNLTKI 735>XP_005263717 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 797 KQNLTKI 803>XP_005263716 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 797 KQNLTKI 803>XP_006712553 Length = 1953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 797 KQNLTKI 803>NP_694591 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PRQNLTKLS 9 PR +L KLS Sbjct: 109 PRPSLAKLS 117>NP_997246 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQNLTKL 8 +QNLTK+ Sbjct: 797 KQNLTKI 803>NP_619542 Length = 1041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QNLTK++ Sbjct: 87 QNLTKIN 93>NP_001273484 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PRQNLTK 7 P QNLT+ Sbjct: 59 PSQNLTR 65>NP_001273759 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PRQNLTK 7 PR+ LTK Sbjct: 13 PREKLTK 19>NP_079040 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PRQNLTK 7 PR+N+T+ Sbjct: 115 PRENITQ 121>NP_064570 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PRQNLTK 7 P QNLT+ Sbjct: 59 PSQNLTR 65>XP_005274600 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QNLTKLS 9 QNLTK++ Sbjct: 105 QNLTKIN 111Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.123 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,692 Number of extensions: 961 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |