Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002370 18 1482 NP_001254772 17 4312 NP_004889 17 4312 NP_849188 17 4312 XP_005262456 17 4312 XP_006714117 17 4312 XP_005265844 17 4312 NP_001132974 17 4312 NP_001132972 17 4312 NP_001132973 17 4312 NP_001094287 16 7355 NP_001009881 16 7355 NP_001229836 16 7355 NP_056993 16 7355 NP_056084 16 7355 NP_663628 16 7355 NP_653181 16 7355 NP_001243537 16 7355 NP_001243533 16 7355 NP_001243538 16 7355 XP_005276697 16 7355 XP_005276696 16 7355 XP_006726829 16 7355 XP_006726828 16 7355 XP_005276694 16 7355 XP_006726827 16 7355 XP_005276693 16 7355 XP_006722653 16 7355 XP_005270740 16 7355 XP_005270739 16 7355 XP_006710563 16 7355 XP_005270738 16 7355 XP_005270737 16 7355 XP_005270736 16 7355 XP_005270735 16 7355 XP_006710562 16 7355 XP_006710561 16 7355 XP_005270733 16 7355 NP_057511 16 7355 NP_006749 15 9605 XP_006726862 15 9605 XP_006723991 15 9605 XP_005267972 15 9605 XP_005267971 15 9605 XP_006720278 15 9605 XP_005267970 15 9605 NP_065766 15 9605>NP_002370 Length = 496 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQDSVQ S Sbjct: 157 PQDSVQDVS 165>NP_001254772 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 683 PQNSTQSAA 691>NP_004889 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 683 PQNSTQSAA 691>NP_849188 Length = 2400 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 P+D V SAS Sbjct: 476 PEDGVDSAS 484>XP_005262456 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDSVQSA 8 QDS+QSA Sbjct: 33 QDSIQSA 39>XP_006714117 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 683 PQNSTQSAA 691>XP_005265844 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 683 PQNSTQSAA 691>NP_001132974 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDSVQSA 8 QDS+QSA Sbjct: 4 QDSIQSA 10>NP_001132972 Length = 255 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDSVQSA 8 QDS+QSA Sbjct: 33 QDSIQSA 39>NP_001132973 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QDSVQSA 8 QDS+QSA Sbjct: 4 QDSIQSA 10>NP_001094287 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>NP_001009881 Length = 1645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1435 PQNSSQSAA 1443>NP_001229836 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>NP_056993 Length = 2371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+D VQSA Sbjct: 2033 PKDIVQSA 2040>NP_056084 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1434 PQNSSQSAA 1442>NP_663628 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>NP_653181 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 P+DS+Q +S Sbjct: 112 PKDSIQFSS 120>NP_001243537 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 P+DS+Q +S Sbjct: 112 PKDSIQFSS 120>NP_001243533 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 P+DS+Q +S Sbjct: 112 PKDSIQFSS 120>NP_001243538 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 P+DS+Q +S Sbjct: 31 PKDSIQFSS 39>XP_005276697 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 298 PQDPEESAS 306>XP_005276696 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 73 PQDPEESAS 81>XP_006726829 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>XP_006726828 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 124 PQDPEESAS 132>XP_005276694 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>XP_006726827 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>XP_005276693 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>XP_006722653 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>XP_005270740 Length = 1530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1313 PQNSSQSAA 1321>XP_005270739 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1324 PQNSSQSAA 1332>XP_006710563 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1364 PQNSSQSAA 1372>XP_005270738 Length = 1614 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1397 PQNSSQSAA 1405>XP_005270737 Length = 1640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1430 PQNSSQSAA 1438>XP_005270736 Length = 1647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1430 PQNSSQSAA 1438>XP_005270735 Length = 1651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1434 PQNSSQSAA 1442>XP_006710562 Length = 1652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1435 PQNSSQSAA 1443>XP_006710561 Length = 1652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1435 PQNSSQSAA 1443>XP_005270733 Length = 1652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PQDSVQSAS 9 PQ+S QSA+ Sbjct: 1435 PQNSSQSAA 1443>NP_057511 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PQDSVQSAS 9 PQD +SAS Sbjct: 87 PQDPEESAS 95>NP_006749 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 PQ+S QSA Sbjct: 55 PQNSSQSA 62>XP_006726862 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 PQ+S QSA Sbjct: 55 PQNSSQSA 62>XP_006723991 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 PQ+S QSA Sbjct: 55 PQNSSQSA 62>XP_005267972 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+DS+Q A Sbjct: 321 PRDSIQLA 328>XP_005267971 Length = 1344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+DS+Q A Sbjct: 321 PRDSIQLA 328>XP_006720278 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+DS+Q A Sbjct: 321 PRDSIQLA 328>XP_005267970 Length = 1377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+DS+Q A Sbjct: 321 PRDSIQLA 328>NP_065766 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PQDSVQSA 8 P+DS+Q A Sbjct: 321 PRDSIQLA 328Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.285 0.0988 0.238 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,883 Number of extensions: 385 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |