Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 20 299 NP_001138386 20 299 NP_000132 20 299 NP_075259 20 299 NP_001138385 20 299 XP_006717776 20 299 XP_006717773 20 299 XP_006717772 20 299 XP_006717771 20 299 NP_037521 16 5631 NP_001095118 16 5631 NP_036473 16 5631 NP_110417 16 5631 NP_003123 16 5631 XP_006725006 16 5631 XP_006717500 16 5631 XP_006715772 16 5631 NP_000243 16 7355 NP_000046 16 7355 NP_009126 16 7355 NP_640338 16 7355 XP_006724885 16 7355 XP_005274744 16 7355 XP_006724884 16 7355 XP_006724883 16 7355 XP_005258249 16 7355 XP_006722441 16 7355 XP_005258248 16 7355 XP_006722440 16 7355 XP_005258245 16 7355 XP_006722439 16 7355 XP_005247742 16 7355 XP_005246214 16 7355 NP_001034702 16 7355 NP_003843 15 9605 NP_056989 15 9605 NP_001135993 15 9605 NP_001135991 15 9605 NP_071357 15 9605 NP_942144 15 9605 NP_001135992 15 9605 NP_001273937 15 9605 NP_001273936 15 9605 NP_060334 15 9605 XP_006716666 15 9605 XP_006716665 15 9605>NP_001138389 Length = 705 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 81 PNNRTVLI 88>NP_001138386 Length = 709 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 81 PNNRTVLI 88>NP_000132 Length = 821 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 81 PNNRTVLI 88>NP_075259 Length = 822 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 81 PNNRTVLI 88>NP_001138385 Length = 769 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 81 PNNRTVLI 88>XP_006717776 Length = 806 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 100 PNNRTVLI 107>XP_006717773 Length = 807 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 100 PNNRTVLI 107>XP_006717772 Length = 838 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 100 PNNRTVLI 107>XP_006717771 Length = 839 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PNNRTVLI 8 PNNRTVLI Sbjct: 100 PNNRTVLI 107>NP_037521 Length = 1359 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNRTVLIV 9 NNRT+L++ Sbjct: 496 NNRTLLLL 503>NP_001095118 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNRTVLIV 9 NNRT+L++ Sbjct: 496 NNRTLLLL 503>NP_036473 Length = 634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN RT+L+ Sbjct: 166 PNTRTLLL 173>NP_110417 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PNNRTVL 7 PNN T+L Sbjct: 144 PNNMTIL 150>NP_003123 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PNNRTVLIV 9 PN R VLI+ Sbjct: 92 PNPRKVLII 100>XP_006725006 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN RT+L+ Sbjct: 119 PNTRTLLL 126>XP_006717500 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN RT+L+ Sbjct: 166 PNTRTLLL 173>XP_006715772 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NNRTVLIV 9 NNRT+L++ Sbjct: 496 NNRTLLLL 503>NP_000243 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 P N+TV++ Sbjct: 233 PENKTVIV 240>NP_000046 Length = 602 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P N TVLI Sbjct: 132 PKNATVLI 139>NP_009126 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 240 PNQQTVLL 247>NP_640338 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PNNRTVLIV 9 P+N TV++V Sbjct: 341 PDNITVMVV 349>XP_006724885 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 P N+TV++ Sbjct: 203 PENKTVIV 210>XP_005274744 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 P N+TV++ Sbjct: 233 PENKTVIV 240>XP_006724884 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 P N+TV++ Sbjct: 240 PENKTVIV 247>XP_006724883 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 P N+TV++ Sbjct: 240 PENKTVIV 247>XP_005258249 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 240 PNQQTVLL 247>XP_006722441 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 240 PNQQTVLL 247>XP_005258248 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 59 PNQQTVLL 66>XP_006722440 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 172 PNQQTVLL 179>XP_005258245 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 172 PNQQTVLL 179>XP_006722439 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNNRTVLI 8 PN +TVL+ Sbjct: 172 PNQQTVLL 179>XP_005247742 Length = 643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P N TVLI Sbjct: 173 PKNATVLI 180>XP_005246214 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NR +LI Sbjct: 99 PENRVILI 106>NP_001034702 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NR +LI Sbjct: 124 PENRVILI 131>NP_003843 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PNNRTV 6 P+NRTV Sbjct: 619 PSNRTV 624>NP_056989 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PNNRTV 6 P+NRTV Sbjct: 653 PSNRTV 658>NP_001135993 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NRT+ + Sbjct: 73 PQNRTIYV 80>NP_001135991 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NRT+ + Sbjct: 73 PQNRTIYV 80>NP_071357 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NRT+ + Sbjct: 73 PQNRTIYV 80>NP_942144 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NRT+ + Sbjct: 73 PQNRTIYV 80>NP_001135992 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 PNNRTVLI 8 P NRT+ + Sbjct: 73 PQNRTIYV 80>NP_001273937 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PNNRTVL 7 P NRTV+ Sbjct: 25 PGNRTVV 31>NP_001273936 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PNNRTVL 7 P NRTV+ Sbjct: 25 PGNRTVV 31>NP_060334 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNNRTVLIV 9 PNN + LI+ Sbjct: 830 PNNHSWLII 838>XP_006716666 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNNRTVLIV 9 PNN + LI+ Sbjct: 721 PNNHSWLII 729>XP_006716665 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNNRTVLIV 9 PNN + LI+ Sbjct: 778 PNNHSWLII 786Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.140 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,050 Number of extensions: 876 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |