Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 509 NP_858045 20 509 NP_006525 20 509 NP_001167559 20 509 NP_001277251 17 4312 NP_005500 17 4312 NP_001277250 17 4312 XP_006714623 17 4312 XP_005271970 17 4312 XP_005271969 17 4312 XP_005271967 17 4312 XP_005271966 17 4312 NP_060119 16 5631 NP_951058 16 5631 NP_001185928 16 7355 NP_705871 16 7355 NP_001482 16 7355 NP_705870 16 7355 NP_705869 16 7355 NP_065909 16 7355 XP_005254747 16 7355 XP_005254746 16 7355 XP_005254745 16 7355 XP_005254744 16 7355 XP_005254743 16 7355 XP_005254742 16 7355 XP_006715118 16 7355 XP_005249054 16 7355 NP_073746 15 9605 NP_079019 15 9605 NP_066962 15 9605 NP_001099147 15 9605 XP_006725063 15 9605 XP_006723397 15 9605 XP_005259220 15 9605 XP_006723396 15 9605 XP_006723395 15 9605 XP_006723394 15 9605 XP_006723393 15 9605 XP_006723392 15 9605 XP_006714368 15 9605 XP_005265758 15 9605 NP_001239204 15 9605 NP_001239203 15 9605 NP_006789 15 9605>NP_001167558 Length = 1423 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PNAMMLSRM 9 PNAMM SRM Sbjct: 1331 PNAMMSSRM 1339>NP_858045 Length = 1424 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PNAMMLSRM 9 PNAMM SRM Sbjct: 1332 PNAMMSSRM 1340>NP_006525 Length = 1420 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PNAMMLSRM 9 PNAMM SRM Sbjct: 1328 PNAMMSSRM 1336>NP_001167559 Length = 1415 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PNAMMLSRM 9 PNAMM SRM Sbjct: 1323 PNAMMSSRM 1331>NP_001277251 Length = 2854 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 422 PNVMMISK 429>NP_005500 Length = 3027 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>NP_001277250 Length = 3048 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>XP_006714623 Length = 1625 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>XP_005271970 Length = 2931 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>XP_005271969 Length = 3020 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 529 PNVMMISK 536>XP_005271967 Length = 3065 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>XP_005271966 Length = 3086 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN MM+S+ Sbjct: 595 PNVMMISK 602>NP_060119 Length = 875 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NA+M SRM Sbjct: 814 NALMASRM 821>NP_951058 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NA+M SRM Sbjct: 792 NALMASRM 799>NP_001185928 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 922 PNGVLLSR 929>NP_705871 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 984 PNGVLLSR 991>NP_001482 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNAMMLSRM 9 PNA + S+M Sbjct: 146 PNAFLASKM 154>NP_705870 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 928 PNGVLLSR 935>NP_705869 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 909 PNGVLLSR 916>NP_065909 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 922 PNGVLLSR 929>XP_005254747 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 941 PNGVLLSR 948>XP_005254746 Length = 1054 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 965 PNGVLLSR 972>XP_005254745 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 978 PNGVLLSR 985>XP_005254744 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 984 PNGVLLSR 991>XP_005254743 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 997 PNGVLLSR 1004>XP_005254742 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PNAMMLSR 8 PN ++LSR Sbjct: 997 PNGVLLSR 1004>XP_006715118 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNAMMLSRM 9 PNA + S+M Sbjct: 146 PNAFLASKM 154>XP_005249054 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PNAMMLSRM 9 PNA + S+M Sbjct: 146 PNAFLASKM 154>NP_073746 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1272 PNAAALSR 1279>NP_079019 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 439 NAMRLSRI 446>NP_066962 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 441 NAMKLSRI 448>NP_001099147 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 448 NAMRLSRI 455>XP_006725063 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 201 NAMRLSRI 208>XP_006723397 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1213 PNAAALSR 1220>XP_005259220 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1272 PNAAALSR 1279>XP_006723396 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1272 PNAAALSR 1279>XP_006723395 Length = 1387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1273 PNAAALSR 1280>XP_006723394 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1292 PNAAALSR 1299>XP_006723393 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1292 PNAAALSR 1299>XP_006723392 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PNAMMLSR 8 PNA LSR Sbjct: 1292 PNAAALSR 1299>XP_006714368 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 201 NAMRLSRI 208>XP_005265758 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 215 NAMKLSRI 222>NP_001239204 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 439 NAMRLSRI 446>NP_001239203 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 605 NAMRLSRI 612>NP_006789 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NAMMLSRM 9 NAM LSR+ Sbjct: 439 NAMRLSRI 446Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.124 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 346,358 Number of extensions: 433 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |