Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 665 NP_996844 19 869 XP_005254439 19 869 XP_006720568 19 869 XP_005254438 19 869 NP_002335 19 869 NP_001128668 17 4312 XP_006723058 17 4312 XP_006717666 17 4312 XP_005269535 17 4312 XP_006717665 17 4312 XP_005269533 17 4312 XP_005269534 17 4312 NP_001073903 17 4312 NP_000370 16 5631 NP_000072 16 7355 NP_005237 16 7355 NP_056537 16 7355 NP_001231873 16 7355 NP_001231875 16 7355 NP_055898 16 7355 NP_057591 16 7355 NP_473364 16 7355 NP_694544 16 7355 NP_001231874 16 7355 XP_005257515 16 7355 XP_005257513 16 7355 XP_005252742 16 7355 XP_006715985 16 7355 XP_006715984 16 7355 XP_005271980 16 7355 XP_006714636 16 7355 XP_006714635 16 7355 XP_005273087 16 7355 XP_005273086 16 7355 XP_005273085 16 7355 XP_005273084 16 7355 NP_001035755 16 7355 NP_001035756 16 7355 NP_065883 15 9605 XP_005245423 15 9605 XP_005245425 15 9605 NP_055714 15 9605>NP_004295 Length = 1620 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV VKTL Sbjct: 1144 PLQVAVKTL 1152>NP_996844 Length = 803 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV +KTL Sbjct: 477 PLQVAIKTL 485>XP_005254439 Length = 475 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV +KTL Sbjct: 149 PLQVAIKTL 157>XP_006720568 Length = 771 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV +KTL Sbjct: 445 PLQVAIKTL 453>XP_005254438 Length = 819 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV +KTL Sbjct: 493 PLQVAIKTL 501>NP_002335 Length = 864 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PLQV +KTL Sbjct: 538 PLQVAIKTL 546>NP_001128668 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1291 PLQVKIKT 1298>XP_006723058 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PLQVVVKTL 9 P QVVVK L Sbjct: 158 PAQVVVKEL 166>XP_006717666 Length = 1289 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1145 PLQVKIKT 1152>XP_005269535 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1291 PLQVKIKT 1298>XP_006717665 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1291 PLQVKIKT 1298>XP_005269533 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1291 PLQVKIKT 1298>XP_005269534 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 PLQV +KT Sbjct: 1291 PLQVKIKT 1298>NP_001073903 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PLQVVVKTL 9 P QVVVK L Sbjct: 187 PAQVVVKEL 195>NP_000370 Length = 1333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PLQVVVKTL 9 PL +V KTL Sbjct: 304 PLSIVEKTL 312>NP_000072 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQVVVKTL 9 LQ+ VKTL Sbjct: 774 LQIYVKTL 781>NP_005237 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LQVVVKTL 9 LQV++KTL Sbjct: 305 LQVMLKTL 312>NP_056537 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P QVV+KT Sbjct: 43 PDQVVIKT 50>NP_001231873 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>NP_001231875 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>NP_055898 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P+QV VKT Sbjct: 604 PVQVSVKT 611>NP_057591 Length = 1490 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P+QV VKT Sbjct: 604 PVQVSVKT 611>NP_473364 Length = 93 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 PLQVVVKTL 9 PL++++KTL Sbjct: 48 PLKLLLKTL 56>NP_694544 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>NP_001231874 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>XP_005257515 Length = 1256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P+QV VKT Sbjct: 604 PVQVSVKT 611>XP_005257513 Length = 1489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P+QV VKT Sbjct: 603 PVQVSVKT 610>XP_005252742 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQVVVKT 8 P QVV+KT Sbjct: 43 PDQVVIKT 50>XP_006715985 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>XP_006715984 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>XP_005271980 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LQVVVKTL 9 LQV++KTL Sbjct: 232 LQVMLKTL 239>XP_006714636 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LQVVVKTL 9 LQV++KTL Sbjct: 305 LQVMLKTL 312>XP_006714635 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LQVVVKTL 9 LQV++KTL Sbjct: 305 LQVMLKTL 312>XP_005273087 Length = 2788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQVVVKTL 9 LQ+ VKTL Sbjct: 774 LQIYVKTL 781>XP_005273086 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQVVVKTL 9 LQ+ VKTL Sbjct: 774 LQIYVKTL 781>XP_005273085 Length = 3755 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQVVVKTL 9 LQ+ VKTL Sbjct: 774 LQIYVKTL 781>XP_005273084 Length = 3801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQVVVKTL 9 LQ+ VKTL Sbjct: 774 LQIYVKTL 781>NP_001035755 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>NP_001035756 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 P+++V KTL Sbjct: 251 PIEIVNKTL 259>NP_065883 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PL+V +KT+ Sbjct: 327 PLKVRIKTI 335>XP_005245423 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PL+V +KT+ Sbjct: 336 PLKVRIKTI 344>XP_005245425 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLQVVVKTL 9 PL+V +KT+ Sbjct: 389 PLKVRIKTI 397>NP_055714 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQVVVK 7 PL+V+VK Sbjct: 326 PLRVIVK 332Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.140 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 362,332 Number of extensions: 535 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |