Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_001136245 17 3301 NP_001136239 17 3301 NP_001136236 17 3301 NP_001136244 17 3301 NP_001136238 17 3301 NP_001136240 17 3301 NP_001136243 17 3301 NP_001136242 17 3301 NP_001136235 17 3301 NP_001136237 17 3301 NP_001136241 17 3301 NP_149045 17 3301 NP_036232 17 3301 XP_006718013 17 3301 XP_005246489 17 3301 XP_005246488 17 3301 XP_005246487 17 3301 NP_036466 16 5631 NP_003205 16 5631 NP_060082 16 5631 XP_006719555 16 5631 XP_005253638 16 5631 XP_006719554 16 5631 XP_006714538 16 5631 NP_001153115 16 7355 NP_060819 16 7355 NP_001159579 16 7355 NP_005509 16 7355 NP_067636 16 7355 XP_005255016 16 7355 XP_005255015 16 7355 XP_005255014 16 7355 XP_006720666 16 7355 XP_006720665 16 7355 XP_005255012 16 7355 NP_000408 15 9605 NP_005434 15 9605 NP_001276968 15 9605 NP_001276969 15 9605 NP_001276994 15 9605 NP_001122401 15 9605 NP_002933 15 9605 NP_001001974 15 9605 NP_067635 15 9605 NP_001182537 15 9605 NP_006835 15 9605 NP_006368 15 9605 NP_001073890 15 9605 XP_006722755 15 9605 XP_005259774 15 9605 XP_005270078 15 9605 XP_006717998 15 9605 XP_005270077 15 9605 XP_005270076 15 9605 XP_005270075 15 9605 XP_005270074 15 9605 XP_005270073 15 9605 XP_005252503 15 9605 XP_006716779 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLQAVDQRD 9 PLQAV QRD Sbjct: 2793 PLQAVAQRD 2801>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PLQAVDQRD 9 PLQAV QRD Sbjct: 2793 PLQAVAQRD 2801>NP_001136245 Length = 1932 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 281 PIQAIDQ 287>NP_001136239 Length = 1915 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 266 PIQAIDQ 272>NP_001136236 Length = 1957 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136244 Length = 1677 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136238 Length = 1952 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136240 Length = 1935 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 281 PIQAIDQ 287>NP_001136243 Length = 1682 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_001136242 Length = 1539 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136235 Length = 1962 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_001136237 Length = 1886 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_001136241 Length = 1790 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 308 PIQAIDQ 314>NP_149045 Length = 1955 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>NP_036232 Length = 485 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQAVDQR 8 PL AVD+R Sbjct: 218 PLNAVDER 225>XP_006718013 Length = 1778 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 P+QA+DQ Sbjct: 303 PIQAIDQ 309>XP_005246489 Length = 432 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQAVDQR 8 PL AVD+R Sbjct: 165 PLNAVDER 172>XP_005246488 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQAVDQR 8 PL AVD+R Sbjct: 204 PLNAVDER 211>XP_005246487 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQAVDQR 8 PL AVD+R Sbjct: 204 PLNAVDER 211>NP_036466 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAVDQRD 9 QAVD RD Sbjct: 393 QAVDSRD 399>NP_003205 Length = 435 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PLQAVDQR 8 PL+AVD R Sbjct: 262 PLEAVDVR 269>NP_060082 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLQAVDQRD 9 P+QA Q+D Sbjct: 389 PMQACQQKD 397>XP_006719555 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLQAVDQRD 9 P+QA Q+D Sbjct: 151 PMQACQQKD 159>XP_005253638 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLQAVDQRD 9 P+QA Q+D Sbjct: 151 PMQACQQKD 159>XP_006719554 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PLQAVDQRD 9 P+QA Q+D Sbjct: 312 PMQACQQKD 320>XP_006714538 Length = 2035 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAVDQRD 9 QAVD RD Sbjct: 393 QAVDSRD 399>NP_001153115 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>NP_060819 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>NP_001159579 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P Q VDQ D Sbjct: 64 PAQYVDQTD 72>NP_005509 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P Q VDQ D Sbjct: 64 PAQYVDQTD 72>NP_067636 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 93 LQANDQKD 100>XP_005255016 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>XP_005255015 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>XP_005255014 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>XP_006720666 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>XP_006720665 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>XP_005255012 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 PLQAVDQR 8 P+Q++DQ+ Sbjct: 249 PIQSLDQK 256>NP_000408 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PLQAVDQ 7 P+Q VDQ Sbjct: 112 PMQPVDQ 118>NP_005434 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 PL +QRD Sbjct: 161 PLHVCEQRD 169>NP_001276968 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 PL+A+DQ Sbjct: 1237 PLRALDQ 1243>NP_001276969 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 PL+A+DQ Sbjct: 1237 PLRALDQ 1243>NP_001276994 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 PL+A+DQ Sbjct: 640 PLRALDQ 646>NP_001122401 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 PL+A+DQ Sbjct: 1249 PLRALDQ 1255>NP_002933 Length = 1378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLQAVDQ 7 PL+A+DQ Sbjct: 1233 PLRALDQ 1239>NP_001001974 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_067635 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_001182537 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>NP_006835 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQAVDQ 7 LQAVDQ Sbjct: 160 LQAVDQ 165>NP_006368 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P AVD RD Sbjct: 180 PDSAVDDRD 188>NP_001073890 Length = 1703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P AVD RD Sbjct: 190 PDSAVDDRD 198>XP_006722755 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P AVD RD Sbjct: 190 PDSAVDDRD 198>XP_005259774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQAVDQ 7 LQAVDQ Sbjct: 160 LQAVDQ 165>XP_005270078 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_006717998 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270077 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270076 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270075 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270074 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005270073 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LQAVDQRD 9 LQA DQ+D Sbjct: 92 LQANDQQD 99>XP_005252503 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PLQAVDQ 7 P+Q VDQ Sbjct: 112 PMQPVDQ 118>XP_006716779 Length = 2399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PLQAVDQRD 9 P AVD RD Sbjct: 192 PDSAVDDRD 200Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.134 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 491,003 Number of extensions: 837 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |