Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 390 NP_001263689 20 390 NP_001119584 20 390 NP_001119586 20 390 NP_001263625 20 390 NP_001119590 20 390 NP_001263690 20 390 NP_001119585 20 390 NP_001263624 20 390 NP_001119588 20 390 NP_001119587 20 390 NP_001119589 20 390 NP_001263627 20 390 NP_001263628 20 390 NP_001263626 20 390 NP_001191121 18 1935 NP_001119713 18 1935 NP_001191117 18 1935 NP_001119712 18 1935 NP_001119714 18 1935 NP_005418 18 1935 NP_001191116 18 1935 NP_001191115 18 1935 NP_001191119 18 1935 NP_001191113 18 1935 NP_001191118 18 1935 NP_001191120 18 1935 NP_001191114 18 1935 NP_001108451 17 2528 NP_001108454 17 2528 NP_003713 17 2528 NP_001108450 17 2528 NP_001108452 17 2528 NP_001108453 17 2528 XP_005247903 17 2528 XP_005247901 17 2528 XP_005247900 17 2528 NP_001156367 17 3301 NP_001156366 17 3301 NP_001156365 17 3301 XP_005245685 17 3301 NP_055471 17 3301 NP_055816 17 4312 NP_000224 16 5631 NP_000360 16 5631 XP_005268094 16 5631 XP_005264366 16 5631 XP_006712078 16 5631 NP_001240658 16 7355 NP_001240657 16 7355 NP_001240656 16 7355 NP_001240659 16 7355 NP_001240662 16 7355 NP_001240661 16 7355 NP_067647 16 7355 NP_038475 16 7355 NP_115960 16 7355 NP_898898 16 7355 NP_001257981 16 7355 NP_001276087 16 7355 XP_005259943 16 7355 XP_005259942 16 7355 XP_005259941 16 7355 XP_005262777 16 7355 XP_005262774 16 7355 NP_001276088 16 7355 NP_005281 15 9605 NP_079235 15 9605 NP_001159530 15 9605 NP_001258949 15 9605 NP_570718 15 9605 XP_006720385 15 9605 XP_005268275 15 9605 XP_006719671 15 9605 XP_006719670 15 9605 NP_003649 15 9605>NP_000537 Length = 393 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 250 PILTIITLE 258>NP_001263689 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 211 PILTIITLE 219>NP_001119584 Length = 393 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 250 PILTIITLE 258>NP_001119586 Length = 341 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 250 PILTIITLE 258>NP_001263625 Length = 302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 211 PILTIITLE 219>NP_001119590 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 211 PILTIITLE 219>NP_001263690 Length = 354 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 211 PILTIITLE 219>NP_001119585 Length = 346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 250 PILTIITLE 258>NP_001263624 Length = 307 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 211 PILTIITLE 219>NP_001119588 Length = 209 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 118 PILTIITLE 126>NP_001119587 Length = 261 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 118 PILTIITLE 126>NP_001119589 Length = 214 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 118 PILTIITLE 126>NP_001263627 Length = 182 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 91 PILTIITLE 99>NP_001263628 Length = 187 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 91 PILTIITLE 99>NP_001263626 Length = 234 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PLLTIITLE 9 P+LTIITLE Sbjct: 91 PILTIITLE 99>NP_001191121 Length = 565 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 199 PILIIITLE 207>NP_001119713 Length = 450 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_001191117 Length = 540 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001119712 Length = 587 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_001119714 Length = 426 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_005418 Length = 636 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001191116 Length = 555 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001191115 Length = 403 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001191119 Length = 506 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_001191113 Length = 499 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001191118 Length = 354 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_001191120 Length = 491 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 221 PILIIITLE 229>NP_001191114 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L IITLE Sbjct: 270 PILIIITLE 278>NP_001108451 Length = 487 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 320 PILIIVTLE 328>NP_001108454 Length = 393 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 226 PILIIVTLE 234>NP_003713 Length = 680 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 320 PILIIVTLE 328>NP_001108450 Length = 555 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 320 PILIIVTLE 328>NP_001108452 Length = 586 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 226 PILIIVTLE 234>NP_001108453 Length = 461 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 226 PILIIVTLE 234>XP_005247903 Length = 483 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 320 PILIIVTLE 328>XP_005247901 Length = 663 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 303 PILIIVTLE 311>XP_005247900 Length = 676 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P+L I+TLE Sbjct: 320 PILIIVTLE 328>NP_001156367 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLLTIITL 8 PLL IITL Sbjct: 36 PLLVIITL 43>NP_001156366 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLLTIITL 8 PLL IITL Sbjct: 36 PLLVIITL 43>NP_001156365 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLLTIITL 8 PLL IITL Sbjct: 36 PLLVIITL 43>XP_005245685 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLLTIITL 8 PLL IITL Sbjct: 36 PLLVIITL 43>NP_055471 Length = 99 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PLLTIITL 8 PLL IITL Sbjct: 36 PLLVIITL 43>NP_055816 Length = 3664 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 P +T++TLE Sbjct: 1640 PSVTVVTLE 1648>NP_000224 Length = 699 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 457 LTVITLE 463>NP_000360 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005268094 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 512 LTVITLE 518>XP_005264366 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 138 LTVITLE 144>XP_006712078 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTIITLE 9 LT+ITLE Sbjct: 147 LTVITLE 153>NP_001240658 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 454 LLTFLTLE 461>NP_001240657 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 469 LLTFLTLE 476>NP_001240656 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 529 LLTFLTLE 536>NP_001240659 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 371 LLTFLTLE 378>NP_001240662 Length = 601 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 346 LLTFLTLE 353>NP_001240661 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 370 LLTFLTLE 377>NP_067647 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 502 LLTFLTLE 509>NP_038475 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 534 PVLTVIT 540>NP_115960 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 354 PVLTVIT 360>NP_898898 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL++I+T E Sbjct: 154 PLISIVTKE 162>NP_001257981 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 476 PVLTVIT 482>NP_001276087 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 302 PVLTVIT 308>XP_005259943 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 262 PVLTVIT 268>XP_005259942 Length = 834 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 545 PVLTVIT 551>XP_005259941 Length = 892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 603 PVLTVIT 609>XP_005262777 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL++I+T E Sbjct: 154 PLISIVTKE 162>XP_005262774 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL++I+T E Sbjct: 154 PLISIVTKE 162>NP_001276088 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 P+LT+IT Sbjct: 228 PVLTVIT 234>NP_005281 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 PLL+I+T Sbjct: 207 PLLSIVT 213>NP_079235 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL+ ++TL+ Sbjct: 367 PLVVVLTLQ 375>NP_001159530 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 488 LLTYLTLE 495>NP_001258949 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PLLTII 6 PLLTII Sbjct: 363 PLLTII 368>NP_570718 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTIITLE 9 LLT +TLE Sbjct: 512 LLTYLTLE 519>XP_006720385 Length = 1683 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PLLTII 6 PLLTII Sbjct: 1409 PLLTII 1414>XP_005268275 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PLLTII 6 PLLTII Sbjct: 1410 PLLTII 1415>XP_006719671 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL+ ++TL+ Sbjct: 367 PLVVVLTLQ 375>XP_006719670 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PLLTIITLE 9 PL+ ++TL+ Sbjct: 172 PLVVVLTLQ 180>NP_003649 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PLLTIIT 7 PLL++IT Sbjct: 71 PLLSVIT 77Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.150 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,248 Number of extensions: 899 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |