Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 175 NP_036462 21 175 NP_001243397 21 175 XP_005269721 21 175 NP_945173 16 5631 NP_689717 16 5631 NP_001364 16 5631 NP_001077059 16 5631 NP_037458 16 5631 XP_006723834 16 5631 XP_005260448 16 5631 XP_005260446 16 5631 XP_006723612 16 5631 XP_006722508 16 5631 XP_006712099 16 5631 XP_005264439 16 5631 XP_005264438 16 5631 XP_006711798 16 5631 NP_060197 16 5631 NP_001182185 16 7355 NP_848618 16 7355 XP_005259432 16 7355 NP_001006659 15 9605 NP_001868 15 9605 NP_490597 15 9605 NP_055114 15 9605 NP_061869 15 9605 NP_001136112 15 9605 NP_665682 15 9605 NP_001230937 15 9605 NP_958357 15 9605 NP_001188410 15 9605 NP_115912 15 9605 NP_001188411 15 9605 NP_004827 15 9605 NP_001188409 15 9605 NP_443179 15 9605 NP_997254 15 9605 NP_001660 15 9605 NP_115622 15 9605 XP_005274573 15 9605 XP_005274572 15 9605 XP_005274571 15 9605 XP_006722063 15 9605 XP_006722062 15 9605 XP_006722061 15 9605 XP_006722060 15 9605 XP_005257605 15 9605 XP_005257604 15 9605 XP_006722059 15 9605 XP_005252508 15 9605 XP_006717511 15 9605 XP_005252507 15 9605 XP_005247083 15 9605 XP_005247080 15 9605 XP_005247079 15 9605 XP_006712295 15 9605 XP_006712294 15 9605 XP_005264706 15 9605 XP_005271318 15 9605 XP_005271317 15 9605 XP_005271314 15 9605 NP_955353 15 9605 NP_942141 15 9605>NP_001243398 Length = 1781 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKTSNANIG 9 P+TSNANIG Sbjct: 1493 PETSNANIG 1501>NP_036462 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKTSNANIG 9 P+TSNANIG Sbjct: 1785 PETSNANIG 1793>NP_001243397 Length = 1890 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKTSNANIG 9 P+TSNANIG Sbjct: 1602 PETSNANIG 1610>XP_005269721 Length = 2073 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PKTSNANIG 9 P+TSNANIG Sbjct: 1785 PETSNANIG 1793>NP_945173 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N N+G Sbjct: 78 PPTQNMNLG 86>NP_689717 Length = 205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN NI Sbjct: 59 PDTSNLNI 66>NP_001364 Length = 4515 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKTSNANI 8 PKT+ AN+ Sbjct: 4127 PKTTTANL 4134>NP_001077059 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK + AN+G Sbjct: 186 PKIATANLG 194>NP_037458 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KTSNANI 8 KT NANI Sbjct: 107 KTKNANI 113>XP_006723834 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N N+G Sbjct: 56 PPTQNMNLG 64>XP_005260448 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N N+G Sbjct: 56 PPTQNMNLG 64>XP_005260446 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N N+G Sbjct: 78 PPTQNMNLG 86>XP_006723612 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN NI Sbjct: 61 PDTSNLNI 68>XP_006722508 Length = 609 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KTSNANI 8 KT NANI Sbjct: 107 KTKNANI 113>XP_006712099 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK + AN+G Sbjct: 186 PKIATANLG 194>XP_005264439 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK + AN+G Sbjct: 231 PKIATANLG 239>XP_005264438 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK + AN+G Sbjct: 231 PKIATANLG 239>XP_006711798 Length = 4586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PKTSNANI 8 PKT+ AN+ Sbjct: 4198 PKTTTANL 4205>NP_060197 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK + AN+G Sbjct: 231 PKIATANLG 239>NP_001182185 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PKTSNAN 7 P+TSN N Sbjct: 198 PETSNTN 204>NP_848618 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 58 PPTENSNTG 66>XP_005259432 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 58 PPTENSNTG 66>NP_001006659 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 PKTSNAN 7 PKT N N Sbjct: 914 PKTPNGN 920>NP_001868 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 PKTSNAN 7 PKT N N Sbjct: 855 PKTPNGN 861>NP_490597 Length = 1362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PKTSNAN 7 P+TSN N Sbjct: 48 PETSNPN 54>NP_055114 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PKTSNAN 7 P+TSN N Sbjct: 48 PETSNPN 54>NP_061869 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 256 PATGNSNSG 264>NP_001136112 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 256 PATGNSNSG 264>NP_665682 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 568 PDTSNINL 575>NP_001230937 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK +NA +G Sbjct: 401 PKLTNALVG 409>NP_958357 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KTSNANIG 9 KTSN N G Sbjct: 127 KTSNMNKG 134>NP_001188410 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 533 PDTSNINL 540>NP_115912 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 564 PDTSNINL 571>NP_001188411 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 528 PDTSNINL 535>NP_004827 Length = 1116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PKT+ +IG Sbjct: 822 PKTNRLHIG 830>NP_001188409 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 589 PDTSNINL 596>NP_443179 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 PK NAN+ Sbjct: 546 PKKPNANL 553>NP_997254 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 583 PKTNNA 588>NP_001660 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 33 PKTANA 38>NP_115622 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SNANIG 9 SNAN+G Sbjct: 420 SNANLG 425>XP_005274573 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 33 PKTANA 38>XP_005274572 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 33 PKTANA 38>XP_005274571 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 33 PKTANA 38>XP_006722063 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_006722062 Length = 1866 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_006722061 Length = 1913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_006722060 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_005257605 Length = 1926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_005257604 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_006722059 Length = 1965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 PKTSNANIG 9 P T N+N G Sbjct: 492 PATGNSNSG 500>XP_005252508 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 583 PKTNNA 588>XP_006717511 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 583 PKTNNA 588>XP_005252507 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PKTSNA 6 PKT+NA Sbjct: 583 PKTNNA 588>XP_005247083 Length = 1699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK +NA +G Sbjct: 401 PKLTNALVG 409>XP_005247080 Length = 1799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK +NA +G Sbjct: 401 PKLTNALVG 409>XP_005247079 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PK +NA +G Sbjct: 401 PKLTNALVG 409>XP_006712295 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 553 PDTSNINL 560>XP_006712294 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PKTSNANI 8 P TSN N+ Sbjct: 558 PDTSNINL 565>XP_005264706 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PKTSNANIG 9 PKT+ +IG Sbjct: 594 PKTNRLHIG 602>XP_005271318 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KTSNANIG 9 KTSN N G Sbjct: 127 KTSNMNKG 134>XP_005271317 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KTSNANIG 9 KTSN N G Sbjct: 127 KTSNMNKG 134>XP_005271314 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KTSNANIG 9 KTSN N G Sbjct: 127 KTSNMNKG 134>NP_955353 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PKTSNAN 7 P+TSN N Sbjct: 327 PQTSNKN 333>NP_942141 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PKTSNAN 7 P+TSN N Sbjct: 305 PQTSNKN 311Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.118 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,263 Number of extensions: 1037 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |