Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_055538 17 4312 XP_006723730 17 4312 XP_005260946 17 4312 XP_005260945 17 4312 NP_075059 16 5631 NP_001127703 16 5631 XP_006713368 16 5631 XP_005265463 16 5631 XP_006713367 16 5631 XP_006713366 16 5631 NP_619723 16 7355 NP_115941 16 7355 NP_000433 16 7355 NP_055721 16 7355 NP_057291 16 7355 XP_005276940 16 7355 XP_005276939 16 7355 XP_005276938 16 7355 XP_005276937 16 7355 XP_006722008 16 7355 XP_006722007 16 7355 XP_005257226 16 7355 XP_005251782 16 7355 XP_006717025 16 7355 XP_006717024 16 7355 XP_005251781 16 7355 XP_005251780 16 7355 XP_005251779 16 7355 XP_005251778 16 7355 XP_005251777 16 7355 XP_005251776 16 7355 XP_005246225 16 7355 XP_005246224 16 7355 NP_078966 15 9605 NP_001275644 15 9605 NP_689484 15 9605 NP_066550 15 9605 NP_001323 15 9605 XP_006723004 15 9605 XP_005273742 15 9605 XP_006714535 15 9605 XP_005248310 15 9605 XP_005248309 15 9605 XP_005248308 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PIYQMSSL 8 PIYQMSSL Sbjct: 1509 PIYQMSSL 1516>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 PIYQMSSL 8 PIYQMSSL Sbjct: 1304 PIYQMSSL 1311>NP_055538 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 PIY +SSL Sbjct: 453 PIYNISSL 460>XP_006723730 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 PIY +SSL Sbjct: 530 PIYNISSL 537>XP_005260946 Length = 527 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 PIY +SSL Sbjct: 486 PIYNISSL 493>XP_005260945 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 PIY +SSL Sbjct: 497 PIYNISSL 504>NP_075059 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 167 PLYQMS 172>NP_001127703 Length = 557 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 204 PLYQMS 209>XP_006713368 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 37 PLYQMS 42>XP_005265463 Length = 390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 37 PLYQMS 42>XP_006713367 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 204 PLYQMS 209>XP_006713366 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PIYQMS 6 P+YQMS Sbjct: 204 PLYQMS 209>NP_619723 Length = 1065 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 707 PVYQMAA 713>NP_115941 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 803 PVYQMAA 809>NP_000433 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>NP_055721 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IYQMSSLS 9 IY+M SLS Sbjct: 639 IYRMQSLS 646>NP_057291 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 PIY SSL+ Sbjct: 267 PIYYASSLA 275>XP_005276940 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_005276939 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_005276938 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_005276937 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_006722008 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_006722007 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PIYQMSS 7 P YQM+S Sbjct: 544 PFYQMTS 550>XP_005257226 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IYQMSSLS 9 IY+M SLS Sbjct: 402 IYRMQSLS 409>XP_005251782 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 714 PVYQMAA 720>XP_006717025 Length = 1085 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 727 PVYQMAA 733>XP_006717024 Length = 1086 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 728 PVYQMAA 734>XP_005251781 Length = 1128 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 770 PVYQMAA 776>XP_005251780 Length = 1138 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 809 PVYQMAA 815>XP_005251779 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 831 PVYQMAA 837>XP_005251778 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 803 PVYQMAA 809>XP_005251777 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 809 PVYQMAA 815>XP_005251776 Length = 1189 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 P+YQM++ Sbjct: 831 PVYQMAA 837>XP_005246225 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 PIY SSL+ Sbjct: 230 PIYYASSLA 238>XP_005246224 Length = 674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 PIY SSL+ Sbjct: 257 PIYYASSLA 265>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 P++Q SSL Sbjct: 13962 PLFQRSSL 13969>NP_001275644 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 PI+Q+SS Sbjct: 254 PIHQLSS 260>NP_689484 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 P YQ+S LS Sbjct: 741 PRYQLSVLS 749>NP_066550 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 P+Y +SLS Sbjct: 666 PVYTATSLS 674>NP_001323 Length = 1225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 PI+Q+SS Sbjct: 345 PIHQLSS 351>XP_006723004 Length = 6443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PIYQMSSL 8 P++Q SSL Sbjct: 5898 PLFQRSSL 5905>XP_005273742 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 P YQ+S LS Sbjct: 730 PRYQLSVLS 738>XP_006714535 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PIYQMSSLS 9 P+Y +SLS Sbjct: 389 PVYTATSLS 397>XP_005248310 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 PI+Q+SS Sbjct: 254 PIHQLSS 260>XP_005248309 Length = 1236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 PI+Q+SS Sbjct: 331 PIHQLSS 337>XP_005248308 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 PIYQMSS 7 PI+Q+SS Sbjct: 345 PIHQLSS 351Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.121 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,960 Number of extensions: 468 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |