Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_722576                                                              20     509
XP_005262424                                                           20     509
XP_006721556                                                           19     869
NP_001273148                                                           17    2528
NP_443139                                                              17    2528
NP_001159773                                                           17    2528
NP_078888                                                              17    2528
XP_006722146                                                           17    2528
XP_006719284                                                           17    2528
XP_006719283                                                           17    2528
XP_006719282                                                           17    2528
NP_065973                                                              17    3301
NP_001002838                                                           17    3301
XP_006724657                                                           17    3301
XP_006724656                                                           17    3301
NP_002464                                                              17    4312
NP_060496                                                              17    4312
XP_005274154                                                           17    4312
NP_001193865                                                           16    5631
NP_001193883                                                           16    5631
NP_004456                                                              16    5631
NP_001192183                                                           16    5631
NP_002529                                                              16    5631
NP_001192184                                                           16    5631
NP_612369                                                              16    5631
NP_009155                                                              16    5631
XP_005248321                                                           16    5631
NP_062824                                                              16    7355
NP_620154                                                              16    7355
XP_005250177                                                           16    7355
NP_004706                                                              15    9605
NP_001189433                                                           15    9605
NP_430255                                                              15    9605
NP_001258449                                                           15    9605
NP_056054                                                              15    9605
NP_001273646                                                           15    9605
NP_001037850                                                           15    9605
NP_003310                                                              15    9605
NP_597676                                                              15    9605
NP_689601                                                              15    9605
NP_001243779                                                           15    9605
NP_596869                                                              15    9605
NP_001273644                                                           15    9605
NP_060988                                                              15    9605
NP_877428                                                              15    9605
NP_004062                                                              15    9605
NP_073752                                                              15    9605
NP_065717                                                              15    9605
NP_997274                                                              15    9605
NP_001073977                                                           15    9605
XP_006722637                                                           15    9605
XP_005266839                                                           15    9605
XP_005257091                                                           15    9605
XP_005257090                                                           15    9605
XP_006720709                                                           15    9605
XP_005254660                                                           15    9605
XP_006718815                                                           15    9605
XP_006717892                                                           15    9605
XP_005251905                                                           15    9605
XP_005251904                                                           15    9605
XP_006715665                                                           15    9605
XP_005266006                                                           15    9605
XP_005266005                                                           15    9605
XP_006714959                                                           15    9605
XP_006714958                                                           15    9605
XP_005266004                                                           15    9605
XP_005246888                                                           15    9605
XP_006712788                                                           15    9605
XP_006712787                                                           15    9605
XP_006712786                                                           15    9605
XP_006712449                                                           15    9605
XP_006712096                                                           15    9605
XP_005264430                                                           15    9605
XP_006712094                                                           15    9605
XP_006712093                                                           15    9605
XP_005264429                                                           15    9605
NP_001155879                                                           15    9605
NP_055601                                                              15    9605
NP_113642                                                              15    9605
NP_001254479                                                           15    9605
NP_597681                                                              15    9605
NP_060022                                                              15    9605
NP_001229267                                                           15    9605
>NP_722576
          Length = 3080

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    IQKTRRKM 9
            IQKTRRKM
Sbjct: 2927 IQKTRRKM 2934
>XP_005262424
          Length = 2875

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    IQKTRRKM 9
            IQKTRRKM
Sbjct: 2722 IQKTRRKM 2729
>XP_006721556
          Length = 1357

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   PIQKTRRKM 9
           P++KTRRK+
Sbjct: 713 PLRKTRRKL 721
>NP_001273148
          Length = 590

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           P QKT+RK
Sbjct: 280 PCQKTKRK 287
>NP_443139
          Length = 1078

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           P QKT+RK
Sbjct: 768 PCQKTKRK 775
>NP_001159773
          Length = 702

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  PIQKTRRKM 9
          PIQK R+K+
Sbjct: 54 PIQKQRKKI 62
>NP_078888
          Length = 779

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  PIQKTRRKM 9
          PIQK R+K+
Sbjct: 54 PIQKQRKKI 62
>XP_006722146
          Length = 752

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  PIQKTRRKM 9
          PIQK R+K+
Sbjct: 54 PIQKQRKKI 62
>XP_006719284
          Length = 676

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           P QKT+RK
Sbjct: 366 PCQKTKRK 373
>XP_006719283
          Length = 968

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           P QKT+RK
Sbjct: 658 PCQKTKRK 665
>XP_006719282
          Length = 968

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           P QKT+RK
Sbjct: 658 PCQKTKRK 665
>NP_065973
          Length = 1800

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI+KTR K
Sbjct: 490 PIKKTREK 497
>NP_001002838
          Length = 1743

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI+KTR K
Sbjct: 490 PIKKTREK 497
>XP_006724657
          Length = 1743

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI+KTR K
Sbjct: 490 PIKKTREK 497
>XP_006724656
          Length = 1743

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI+KTR K
Sbjct: 490 PIKKTREK 497
>NP_002464
          Length = 1960

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    IQKTRRKM 9
            ++KTRRK+
Sbjct: 1046 LEKTRRKL 1053
>NP_060496
          Length = 963

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   IQKTRRKM 9
           ++KTRRK+
Sbjct: 311 VKKTRRKL 318
>XP_005274154
          Length = 630

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   IQKTRRKM 9
           ++KTRRK+
Sbjct: 311 VKKTRRKL 318
>NP_001193865
          Length = 355

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   QKTRRK 8
           QKTRRK
Sbjct: 344 QKTRRK 349
>NP_001193883
          Length = 325

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   QKTRRK 8
           QKTRRK
Sbjct: 314 QKTRRK 319
>NP_004456
          Length = 208

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   QKTRRK 8
           QKTRRK
Sbjct: 190 QKTRRK 195
>NP_001192183
          Length = 522

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KTRRKM 9
           KTRRKM
Sbjct: 266 KTRRKM 271
>NP_002529
          Length = 522

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   KTRRKM 9
           KTRRKM
Sbjct: 266 KTRRKM 271
>NP_001192184
          Length = 271

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  KTRRKM 9
          KTRRKM
Sbjct: 15 KTRRKM 20
>NP_612369
          Length = 1372

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    PIQKTRRK 8
            P+QK RR+
Sbjct: 1046 PLQKKRRR 1053
>NP_009155
          Length = 308

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  PIQKTRRK 8
          P Q+T+RK
Sbjct: 87 PAQRTKRK 94
>XP_005248321
          Length = 208

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   QKTRRK 8
           QKTRRK
Sbjct: 190 QKTRRK 195
>NP_062824
          Length = 710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  IQKTRRK 8
          ++KTRRK
Sbjct: 9  LEKTRRK 15
>NP_620154
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   PIQKTRRK 8
           P++KT+R+
Sbjct: 464 PVKKTQRR 471
>XP_005250177
          Length = 673

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   QKTRRKM 9
           QKTRR++
Sbjct: 208 QKTRRRL 214
>NP_004706
          Length = 961

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PIQKTR 6
           PI+KTR
Sbjct: 650 PIEKTR 655
>NP_001189433
          Length = 842

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PIQKTR 6
           PI+KTR
Sbjct: 531 PIEKTR 536
>NP_430255
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PIQKTR 6
           PI+KTR
Sbjct: 650 PIEKTR 655
>NP_001258449
          Length = 213

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PIQKTRRKM 9
           P Q+ RRK+
Sbjct: 152 PTQRGRRKL 160
>NP_056054
          Length = 1186

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QKTRRKM 9
          +KTRR+M
Sbjct: 53 EKTRREM 59
>NP_001273646
          Length = 1238

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   QKTRRKM 9
           +KTRR+M
Sbjct: 105 EKTRREM 111
>NP_001037850
          Length = 408

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   IQKTRRK 8
           IQK RRK
Sbjct: 124 IQKPRRK 130
>NP_003310
          Length = 26926

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PIQKTRRKM 9
            PI+  RRK+
Sbjct: 4586 PIEAERRKL 4594
>NP_597676
          Length = 27051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PIQKTRRKM 9
            PI+  RRK+
Sbjct: 4711 PIEAERRKL 4719
>NP_689601
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   IQKTRRK 8
           IQK RRK
Sbjct: 116 IQKPRRK 122
>NP_001243779
          Length = 34350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1     PIQKTRRKM 9
             PI+  RRK+
Sbjct: 12010 PIEAERRKL 12018
>NP_596869
          Length = 33423

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1     PIQKTRRKM 9
             PI+  RRK+
Sbjct: 11083 PIEAERRKL 11091
>NP_001273644
          Length = 1278

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   QKTRRKM 9
           +KTRR+M
Sbjct: 105 EKTRREM 111
>NP_060988
          Length = 874

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   IQKTRRKM 9
           IQ+TR+K+
Sbjct: 498 IQETRQKL 505
>NP_877428
          Length = 875

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   IQKTRRKM 9
           IQ+TR+K+
Sbjct: 499 IQETRQKL 506
>NP_004062
          Length = 484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 403 IQKTRKR 409
>NP_073752
          Length = 1460

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   PIQKTRR 7
           P+Q+TR+
Sbjct: 369 PVQRTRQ 375
>NP_065717
          Length = 481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 401 IQKTRKR 407
>NP_997274
          Length = 235

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  IQKTRRK 8
          +QKTR+K
Sbjct: 40 LQKTRQK 46
>NP_001073977
          Length = 607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  IQKTRRKM 9
          +QK RRK+
Sbjct: 34 LQKKRRKL 41
>XP_006722637
          Length = 860

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PIQKTR 6
           PI+KTR
Sbjct: 549 PIEKTR 554
>XP_005266839
          Length = 867

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   PIQKTR 6
           PI+KTR
Sbjct: 650 PIEKTR 655
>XP_005257091
          Length = 269

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QKTRRKM 9
          Q+TRRK+
Sbjct: 45 QRTRRKV 51
>XP_005257090
          Length = 279

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QKTRRKM 9
          Q+TRRK+
Sbjct: 45 QRTRRKV 51
>XP_006720709
          Length = 1189

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   PIQKTRR 7
           P+Q+TR+
Sbjct: 98  PVQRTRQ 104
>XP_005254660
          Length = 1460

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   PIQKTRR 7
           P+Q+TR+
Sbjct: 369 PVQRTRQ 375
>XP_006718815
          Length = 1057

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   PIQKTRRKM 9
           PI KTR  M
Sbjct: 483 PIMKTRSGM 491
>XP_006717892
          Length = 245

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PIQKTRRKM 9
           P Q+ RRK+
Sbjct: 152 PTQRGRRKL 160
>XP_005251905
          Length = 1226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QKTRRKM 9
          +KTRR+M
Sbjct: 53 EKTRREM 59
>XP_005251904
          Length = 1226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  QKTRRKM 9
          +KTRR+M
Sbjct: 53 EKTRREM 59
>XP_006715665
          Length = 375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  IQKTRRKM 9
          +QK RRK+
Sbjct: 34 LQKKRRKL 41
>XP_005266006
          Length = 301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 221 IQKTRKR 227
>XP_005266005
          Length = 301

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 221 IQKTRKR 227
>XP_006714959
          Length = 445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 365 IQKTRKR 371
>XP_006714958
          Length = 445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 365 IQKTRKR 371
>XP_005266004
          Length = 484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 404 IQKTRKR 410
>XP_005246888
          Length = 22663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   PIQKTRRKM 9
           PI+  RRK+
Sbjct: 323 PIEAERRKL 331
>XP_006712788
          Length = 24022

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PIQKTRRKM 9
            PI+  RRK+
Sbjct: 1682 PIEAERRKL 1690
>XP_006712787
          Length = 33978

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1     PIQKTRRKM 9
             PI+  RRK+
Sbjct: 11638 PIEAERRKL 11646
>XP_006712786
          Length = 35484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1     PIQKTRRKM 9
             PI+  RRK+
Sbjct: 13144 PIEAERRKL 13152
>XP_006712449
          Length = 1908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    PIQKTRR 7
            P+Q TRR
Sbjct: 1901 PLQATRR 1907
>XP_006712096
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 242 PIEEDRRK 249
>XP_005264430
          Length = 1044

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 484 PIEEDRRK 491
>XP_006712094
          Length = 1067

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 912 PIEEDRRK 919
>XP_006712093
          Length = 1460

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 912 PIEEDRRK 919
>XP_005264429
          Length = 1472

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 912 PIEEDRRK 919
>NP_001155879
          Length = 526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   IQKTRRK 8
           IQKTR++
Sbjct: 445 IQKTRKR 451
>NP_055601
          Length = 2063

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    PIQKTRRKM 9
            PI KTR  M
Sbjct: 1489 PIMKTRSGM 1497
>NP_113642
          Length = 669

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   IQKTRRKM 9
           +QK RRK+
Sbjct: 419 LQKMRRKL 426
>NP_001254479
          Length = 35991

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1     PIQKTRRKM 9
             PI+  RRK+
Sbjct: 13651 PIEAERRKL 13659
>NP_597681
          Length = 27118

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    PIQKTRRKM 9
            PI+  RRK+
Sbjct: 4778 PIEAERRKL 4786
>NP_060022
          Length = 1458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 898 PIEEDRRK 905
>NP_001229267
          Length = 1453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   PIQKTRRK 8
           PI++ RRK
Sbjct: 898 PIEEDRRK 905
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.325    0.132    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 518,106
Number of extensions: 1146
Number of successful extensions: 83
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 83
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package