Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_002172 18 1935 NP_001008781 17 3301 XP_006718827 17 3301 NP_065173 17 4312 NP_001438 16 5631 XP_006726571 16 5631 XP_006726570 16 5631 XP_003960511 16 5631 XP_005269723 16 5631 XP_006717414 16 5631 XP_006714824 16 5631 XP_006710284 16 5631 NP_000184 16 7355 NP_055542 16 7355 NP_001158067 16 7355 XP_006723578 16 7355 XP_006723577 16 7355 XP_006723576 16 7355 NP_110380 15 9605 NP_001159403 15 9605 NP_001025 15 9605 NP_071342 15 9605 NP_001094282 15 9605 NP_690007 15 9605 NP_001193499 15 9605 NP_001013049 15 9605 NP_001193501 15 9605 NP_443150 15 9605 NP_001193500 15 9605 NP_001193498 15 9605 NP_001078869 15 9605 NP_001078868 15 9605 NP_065694 15 9605 NP_690008 15 9605 NP_071907 15 9605 XP_005259213 15 9605 XP_005259212 15 9605 XP_005259211 15 9605 XP_006723388 15 9605 XP_005259210 15 9605 XP_006723387 15 9605 XP_005259209 15 9605 NP_690009 15 9605 NP_775813 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 153 PGTRVRAMA 161>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 114 PGTRVRAMA 122>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 153 PGTRVRAMA 161>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 153 PGTRVRAMA 161>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 114 PGTRVRAMA 122>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 114 PGTRVRAMA 122>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 114 PGTRVRAMA 122>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 153 PGTRVRAMA 161>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 114 PGTRVRAMA 122>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 21 PGTRVRAMA 29>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 21 PGTRVRAMA 29>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PGTRVLAMA 9 PGTRV AMA Sbjct: 21 PGTRVRAMA 29>NP_002172 Length = 411 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG RVLAM Sbjct: 225 PGDRVLAM 232>NP_001008781 Length = 4557 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGTRVLAM 8 PGT+VLA+ Sbjct: 3251 PGTQVLAV 3258>XP_006718827 Length = 3479 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 PGTRVLAM 8 PGT+VLA+ Sbjct: 2141 PGTQVLAV 2148>NP_065173 Length = 879 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PGTRVLA 7 PG+RVLA Sbjct: 326 PGSRVLA 332>NP_001438 Length = 4349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PGT VLA+ Sbjct: 473 PGTSVLAV 480>XP_006726571 Length = 3681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG RVL +A Sbjct: 682 PGGRVLTLA 690>XP_006726570 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG RVL +A Sbjct: 682 PGGRVLTLA 690>XP_003960511 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG RVL +A Sbjct: 682 PGGRVLTLA 690>XP_005269723 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PGTRVL 6 PGTR+L Sbjct: 3 PGTRIL 8>XP_006717414 Length = 5100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG RVL +A Sbjct: 2060 PGGRVLTLA 2068>XP_006714824 Length = 4349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PGT VLA+ Sbjct: 473 PGTSVLAV 480>XP_006710284 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG RVL +A Sbjct: 686 PGGRVLTLA 694>NP_000184 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG RVLA Sbjct: 220 PGDRVLA 226>NP_055542 Length = 2715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG RVL++ Sbjct: 2170 PGVRVLSL 2177>NP_001158067 Length = 1036 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG RVLA Sbjct: 160 PGPRVLA 166>XP_006723578 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG RVL++ Sbjct: 532 PGVRVLSL 539>XP_006723577 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG RVL++ Sbjct: 1406 PGVRVLSL 1413>XP_006723576 Length = 2313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG RVL++ Sbjct: 2170 PGVRVLSL 2177>NP_110380 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GTRVLA 7 GTRVLA Sbjct: 16 GTRVLA 21>NP_001159403 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GTRVLA 7 GTRVLA Sbjct: 99 GTRVLA 104>NP_001025 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GTRVLA 7 GTRVLA Sbjct: 39 GTRVLA 44>NP_071342 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG+RVL + Sbjct: 26 PGSRVLLL 33>NP_001094282 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG+RVL + Sbjct: 26 PGSRVLLL 33>NP_690007 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 382 PGPRILA 388>NP_001193499 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_001013049 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_001193501 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_443150 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_001193500 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_001193498 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PGTRVLAMA 9 PG RVL A Sbjct: 1075 PGVRVLVHA 1083>NP_001078869 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG+ VLA A Sbjct: 7 PGSAVLAAA 15>NP_001078868 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PGTRVLAMA 9 PG+ VLA A Sbjct: 7 PGSAVLAAA 15>NP_065694 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG +VLA+ Sbjct: 155 PGDKVLAL 162>NP_690008 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 384 PGPRILA 390>NP_071907 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 315 PGPRILA 321>XP_005259213 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 428 PGPRILA 434>XP_005259212 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 428 PGPRILA 434>XP_005259211 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 315 PGPRILA 321>XP_006723388 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 315 PGPRILA 321>XP_005259210 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 333 PGPRILA 339>XP_006723387 Length = 667 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 382 PGPRILA 388>XP_005259209 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 428 PGPRILA 434>NP_690009 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 PGTRVLA 7 PG R+LA Sbjct: 315 PGPRILA 321>NP_775813 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PGTRVLAM 8 PG+RVL + Sbjct: 393 PGSRVLTI 400Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.133 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,078 Number of extensions: 478 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |