Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_112484 16 7355 NP_001230455 16 7355 NP_001177809 16 7355 NP_056044 16 7355 NP_001073944 16 7355 NP_113618 16 7355 XP_006725320 16 7355 XP_006725319 16 7355 XP_005256868 16 7355 XP_006721649 16 7355 XP_005256625 16 7355 XP_005256624 16 7355 XP_005256622 16 7355 XP_006721555 16 7355 XP_006721554 16 7355 XP_005246602 16 7355 XP_006712584 16 7355 XP_005246601 16 7355 XP_005246600 16 7355 XP_005271297 16 7355 XP_006711000 16 7355 XP_005271296 16 7355 NP_004111 15 9605 NP_003214 15 9605 NP_064579 15 9605 NP_001263997 15 9605 NP_002044 15 9605 NP_001263992 15 9605 NP_001263995 15 9605 NP_001263991 15 9605 NP_001263993 15 9605 NP_001263994 15 9605 NP_001263990 15 9605 NP_065118 15 9605 NP_060754 15 9605 NP_001266280 15 9605 NP_001266279 15 9605 XP_006712702 15 9605 XP_005246745 15 9605 XP_005246744 15 9605 XP_005246743 15 9605 XP_005246742 15 9605 XP_006712701 15 9605 XP_005246741 15 9605 XP_006712700 15 9605 XP_005246740 15 9605 XP_005246739 15 9605 XP_005246738 15 9605 XP_005270798 15 9605 XP_006710637 15 9605>NP_112484 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>NP_001230455 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>NP_001177809 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>NP_056044 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1140 PKALKVA 1146>NP_001073944 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALKVAA 8 EALK+AA Sbjct: 449 EALKIAA 455>NP_113618 Length = 401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EALKVAAR 9 EA+KVA R Sbjct: 288 EAMKVAVR 295>XP_006725320 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EALKVAAR 9 EA+KVA R Sbjct: 288 EAMKVAVR 295>XP_006725319 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EALKVAAR 9 EA+KVA R Sbjct: 286 EAMKVAVR 293>XP_005256868 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EALKVAAR 9 EA+KVA R Sbjct: 288 EAMKVAVR 295>XP_006721649 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EALKVAAR 9 EA+KVA R Sbjct: 286 EAMKVAVR 293>XP_005256625 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1178 PKALKVA 1184>XP_005256624 Length = 1348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1179 PKALKVA 1185>XP_005256622 Length = 1383 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1214 PKALKVA 1220>XP_006721555 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1275 PKALKVA 1281>XP_006721554 Length = 1445 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 PEALKVA 7 P+ALKVA Sbjct: 1276 PKALKVA 1282>XP_005246602 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALKVAA 8 EALK+AA Sbjct: 449 EALKIAA 455>XP_006712584 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALKVAA 8 EALK+AA Sbjct: 449 EALKIAA 455>XP_005246601 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALKVAA 8 EALK+AA Sbjct: 449 EALKIAA 455>XP_005246600 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EALKVAA 8 EALK+AA Sbjct: 449 EALKIAA 455>XP_005271297 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>XP_006711000 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>XP_005271296 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEAL AAR Sbjct: 45 PEALARAAR 53>NP_004111 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PEALKV 6 PEALK+ Sbjct: 25 PEALKI 30>NP_003214 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PE LKV A+ Sbjct: 185 PEKLKVIAQ 193>NP_064579 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>NP_001263997 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_002044 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PEALKV 6 PEALK+ Sbjct: 25 PEALKI 30>NP_001263992 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_001263995 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_001263991 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_001263993 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_001263994 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>NP_001263990 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>NP_065118 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEA K+A + Sbjct: 210 PEAAKIARK 218>NP_060754 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PEALKV 6 PEALK+ Sbjct: 25 PEALKI 30>NP_001266280 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEA K+A + Sbjct: 117 PEAAKIARK 125>NP_001266279 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PEALKVAAR 9 PEA K+A + Sbjct: 73 PEAAKIARK 81>XP_006712702 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>XP_005246745 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_005246744 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_005246743 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_005246742 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_006712701 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>XP_005246741 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_006712700 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>XP_005246740 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 24 PEKLKVA 30>XP_005246739 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_005246738 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PEALKVA 7 PE LKVA Sbjct: 50 PEKLKVA 56>XP_005270798 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PEALKV 6 PEALK+ Sbjct: 25 PEALKI 30>XP_006710637 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PEALKV 6 PEALK+ Sbjct: 25 PEALKI 30Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.123 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,040 Number of extensions: 556 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |