Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 390 NP_078858 20 509 NP_001278232 20 509 NP_001278214 20 509 NP_001784 18 1935 NP_005236 17 2528 NP_001399 17 2528 XP_006714202 17 2528 XP_005262892 17 2528 XP_005262891 17 2528 XP_006710468 17 2528 XP_005270637 17 2528 NP_001438 17 3301 XP_006714824 17 3301 NP_001783 17 4312 NP_000205 17 4312 NP_005520 17 4312 XP_005258239 17 4312 XP_005258238 17 4312 XP_006710661 17 4312 XP_005245920 17 4312 XP_006710660 17 4312 XP_006710659 17 4312 XP_006710658 17 4312 XP_006710657 17 4312 NP_065168 16 5631 NP_694545 16 5631 NP_001074295 16 7355 NP_001239268 16 7355 NP_001239267 16 7355 NP_001785 16 7355 NP_060109 16 7355 NP_003669 16 7355 NP_001002878 16 7355 NP_001002879 16 7355 NP_001002877 16 7355 XP_005261856 16 7355 XP_006724410 16 7355 XP_005261855 16 7355 XP_005261854 16 7355 XP_005272427 16 7355 XP_005272426 16 7355 NP_001001563 16 7355 NP_001004480 16 7355 NP_000375 15 9605 NP_689777 15 9605 NP_060360 15 9605 NP_057664 15 9605 NP_001098991 15 9605 NP_055061 15 9605 NP_061763 15 9605 XP_006724446 15 9605 XP_006717843 15 9605 XP_005252734 15 9605 XP_005252733 15 9605 XP_005252732 15 9605 XP_005252731 15 9605 XP_005252730 15 9605 XP_005252729 15 9605 XP_005250858 15 9605 XP_005250857 15 9605 NP_660156 15 9605 NP_061822 15 9605>NP_004351 Length = 882 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAYTLVVQA 9 P YTLVVQA Sbjct: 339 PTYTLVVQA 347>NP_078858 Length = 4981 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PAYTLVVQA 9 PAY+LV+QA Sbjct: 1279 PAYSLVIQA 1287Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 2223 PTYHLTVQA 2231>NP_001278232 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PAYTLVVQA 9 PAY+LV+QA Sbjct: 1279 PAYSLVIQA 1287Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 2223 PTYHLTVQA 2231>NP_001278214 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 PAYTLVVQA 9 PAY+LV+QA Sbjct: 1279 PAYSLVIQA 1287Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 2223 PTYHLTVQA 2231>NP_001784 Length = 829 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAYTLVVQA 9 P YTL +QA Sbjct: 292 PEYTLTIQA 300>NP_005236 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 YTL VQA Sbjct: 3406 YTLTVQA 3412>NP_001399 Length = 2923 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAYTLVVQA 9 P Y LV+QA Sbjct: 990 PEYVLVIQA 998>XP_006714202 Length = 4588 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 YTL VQA Sbjct: 3406 YTLTVQA 3412>XP_005262892 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 YTL VQA Sbjct: 3406 YTLTVQA 3412>XP_005262891 Length = 4600 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTL++Q Sbjct: 1731 PIYTLIIQ 1738Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 YTL VQA Sbjct: 3406 YTLTVQA 3412>XP_006710468 Length = 2916 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAYTLVVQA 9 P Y LV+QA Sbjct: 990 PEYVLVIQA 998>XP_005270637 Length = 2921 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAYTLVVQA 9 P Y LV+QA Sbjct: 990 PEYVLVIQA 998>NP_001438 Length = 4349 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AYTLVVQA 9 +YTL++QA Sbjct: 114 SYTLIIQA 121>XP_006714824 Length = 4349 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AYTLVVQA 9 +YTL++QA Sbjct: 114 SYTLIIQA 121>NP_001783 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YTL++QA Sbjct: 345 YTLIIQA 351>NP_000205 Length = 1218 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1174 PAYTLV 1179>NP_005520 Length = 4391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1800 PAYTLV 1805>XP_005258239 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YTL++QA Sbjct: 314 YTLIIQA 320>XP_005258238 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YTL++QA Sbjct: 327 YTLIIQA 333>XP_006710661 Length = 4057 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1983 PAYTLV 1988>XP_005245920 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1801 PAYTLV 1806>XP_006710660 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1800 PAYTLV 1805>XP_006710659 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1959 PAYTLV 1964>XP_006710658 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1966 PAYTLV 1971>XP_006710657 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYTLV Sbjct: 1982 PAYTLV 1987>NP_065168 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAYTLVVQA 9 P Y+LVV+A Sbjct: 331 PDYSLVVRA 339>NP_694545 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTL+++ Sbjct: 118 PTYTLIIR 125>NP_001074295 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYT+V Sbjct: 157 PAYTMV 162>NP_001239268 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YT++VQA Sbjct: 281 YTVIVQA 287>NP_001239267 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YT++VQA Sbjct: 318 YTVIVQA 324>NP_001785 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YTLVVQA 9 YT++VQA Sbjct: 355 YTVIVQA 361>NP_060109 Length = 2916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AYTLVVQA 9 +Y+L+VQA Sbjct: 1857 SYSLIVQA 1864>NP_003669 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>NP_001002878 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>NP_001002879 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>NP_001002877 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>XP_005261856 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>XP_006724410 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>XP_005261855 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>XP_005261854 Length = 694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 PAYTLVVQA 9 P Y L VQA Sbjct: 267 PLYVLFVQA 275>XP_005272427 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYT+V Sbjct: 157 PAYTMV 162>XP_005272426 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PAYTLV 6 PAYT+V Sbjct: 157 PAYTMV 162>NP_001001563 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P YTLV++ Sbjct: 249 PPYTLVLE 256>NP_001004480 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AYTLVVQA 9 +YTLV++A Sbjct: 235 SYTLVIRA 242>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 PAYTLVV 7 P+YTL++ Sbjct: 3293 PSYTLIL 3299>NP_689777 Length = 3997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P Y++V+Q Sbjct: 2780 PEYSIVIQ 2787>NP_060360 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>NP_057664 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAYTLVVQA 9 PAY + VQA Sbjct: 316 PAYEVDVQA 324>NP_001098991 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>NP_055061 Length = 3014 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 Y LVVQA Sbjct: 1070 YVLVVQA 1076>NP_061763 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 YTL +QA Sbjct: 315 YTLTIQA 321>XP_006724446 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YTLVVQA 9 Y LVVQA Sbjct: 1070 YVLVVQA 1076>XP_006717843 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252734 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252733 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252732 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252731 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252730 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252729 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AYTLVVQA 9 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005250858 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>XP_005250857 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 PAYTLVVQ 8 P Y++V+Q Sbjct: 2805 PEYSIVIQ 2812>NP_660156 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PAYTLVVQ 8 P Y L+VQ Sbjct: 99 PIYKLIVQ 106>NP_061822 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AYTLVV 7 AYTLVV Sbjct: 70 AYTLVV 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 346,956 Number of extensions: 428 Number of successful extensions: 70 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |