Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1135 NP_653080 18 1135 XP_005267292 18 1135 XP_005267291 18 1135 XP_005267290 18 1135 NP_004247 17 2528 NP_002799 17 2528 NP_001265637 17 2528 NP_001265638 17 2528 NP_997275 17 4312 NP_001231776 17 4312 NP_004685 16 5631 NP_001167637 16 5631 XP_006722232 16 5631 XP_005257846 16 5631 NP_525022 16 7355 NP_001275915 16 7355 NP_001275914 16 7355 NP_009099 16 7355 NP_525021 16 7355 XP_005256997 16 7355 XP_005256995 16 7355 XP_005256993 16 7355 XP_005256992 16 7355 XP_006721697 16 7355 XP_006721696 16 7355 XP_005256991 16 7355 NP_443187 16 7355 NP_001931 15 9605 NP_001007027 15 9605 NP_057336 15 9605 NP_037361 15 9605 NP_001155244 15 9605 NP_000860 15 9605 NP_998786 15 9605 NP_060955 15 9605 NP_863651 15 9605 NP_001258679 15 9605 NP_001275696 15 9605 NP_036234 15 9605 NP_001036147 15 9605 NP_001036146 15 9605 NP_001013712 15 9605 NP_001258678 15 9605 XP_005255638 15 9605 XP_006721154 15 9605 XP_005268927 15 9605 XP_006712120 15 9605 XP_005264512 15 9605 XP_005264511 15 9605 XP_006712119 15 9605 XP_005264510 15 9605 XP_006712118 15 9605 XP_005264509 15 9605 XP_005264508 15 9605 XP_006712117 15 9605 XP_005264507 15 9605 XP_005264506 15 9605 XP_006710717 15 9605 XP_005263523 15 9605 XP_005263522 15 9605 XP_006710716 15 9605 XP_005263521 15 9605 NP_001098717 15 9605 NP_079018 15 9605>NP_005091 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PAVV LSEY Sbjct: 844 PAVVPLSEY 852>NP_653080 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PAVV LSEY Sbjct: 746 PAVVPLSEY 754>XP_005267292 Length = 1677 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PAVV LSEY Sbjct: 739 PAVVPLSEY 747>XP_005267291 Length = 1684 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PAVV LSEY Sbjct: 746 PAVVPLSEY 754>XP_005267290 Length = 1782 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PAVV LSEY Sbjct: 844 PAVVPLSEY 852>NP_004247 Length = 551 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P V+LL EY Sbjct: 468 PLVILLGEY 476>NP_002799 Length = 908 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA+ LLS+Y Sbjct: 461 PALALLSDY 469>NP_001265637 Length = 778 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA+ LLS+Y Sbjct: 331 PALALLSDY 339>NP_001265638 Length = 749 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA+ LLS+Y Sbjct: 302 PALALLSDY 310>NP_997275 Length = 99 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 PAVVLLS 7 PAVVLLS Sbjct: 7 PAVVLLS 13>NP_001231776 Length = 85 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 PAVVLLS 7 PAVVLLS Sbjct: 7 PAVVLLS 13>NP_004685 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P V +LS+Y Sbjct: 135 PTVTILSQY 143>NP_001167637 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P V +LS+Y Sbjct: 135 PTVTILSQY 143>XP_006722232 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P V +LS+Y Sbjct: 135 PTVTILSQY 143>XP_005257846 Length = 523 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P V +LS+Y Sbjct: 135 PTVTILSQY 143>NP_525022 Length = 1624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1439 PSVVLLDE 1446>NP_001275915 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1431 PSVVLLDE 1438>NP_001275914 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1436 PSVVLLDE 1443>NP_009099 Length = 1581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1396 PSVVLLDE 1403>NP_525021 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1358 PSVVLLDE 1365>XP_005256997 Length = 1560 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1375 PSVVLLDE 1382>XP_005256995 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1436 PSVVLLDE 1443>XP_005256993 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1358 PSVVLLDE 1365>XP_005256992 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1358 PSVVLLDE 1365>XP_006721697 Length = 1625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1447 PSVVLLDE 1454>XP_006721696 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1447 PSVVLLDE 1454>XP_005256991 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PAVVLLSE 8 P+VVLL E Sbjct: 1447 PSVVLLDE 1454>NP_443187 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 P+ +LL EY Sbjct: 153 PSEILLQEY 161>NP_001931 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 881 PALRTLSEY 889>NP_001007027 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 881 PALRTLSEY 889>NP_057336 Length = 4857 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3215 PAAVLLKE 3222>NP_037361 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLSEY 9 AVV LS+Y Sbjct: 844 AVVALSQY 851>NP_001155244 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++ LS+Y Sbjct: 17 PALLRLSDY 25>NP_000860 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++ LS+Y Sbjct: 38 PALLRLSDY 46>NP_998786 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++ LS+Y Sbjct: 38 PALLRLSDY 46>NP_060955 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 P+++LL+ Y Sbjct: 111 PSIILLTMY 119>NP_863651 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVVLLSEY 9 AVV LS+Y Sbjct: 855 AVVALSQY 862>NP_001258679 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 P+++LL+ Y Sbjct: 111 PSIILLTMY 119>NP_001275696 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++LLS + Sbjct: 619 PALLLLSRF 627>NP_036234 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 1251 PALRTLSEY 1259>NP_001036147 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 697 PALRTLSEY 705>NP_001036146 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 1251 PALRTLSEY 1259>NP_001013712 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PAVVLLSE 8 P+V+L+SE Sbjct: 485 PSVLLISE 492>NP_001258678 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 P+++LL+ Y Sbjct: 111 PSIILLTMY 119>XP_005255638 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++LLS + Sbjct: 556 PALLLLSRF 564>XP_006721154 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++LLS + Sbjct: 556 PALLLLSRF 564>XP_005268927 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 PAVVLLSE 8 P+V+L+SE Sbjct: 485 PSVLLISE 492>XP_006712120 Length = 4812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3170 PAAVLLKE 3177>XP_005264512 Length = 4840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3198 PAAVLLKE 3205>XP_005264511 Length = 4847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3242 PAAVLLKE 3249>XP_006712119 Length = 4851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3209 PAAVLLKE 3216>XP_005264510 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3219 PAAVLLKE 3226>XP_006712118 Length = 4864 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3242 PAAVLLKE 3249>XP_005264509 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3228 PAAVLLKE 3235>XP_005264508 Length = 4875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3233 PAAVLLKE 3240>XP_006712117 Length = 4878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3236 PAAVLLKE 3243>XP_005264507 Length = 4880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3238 PAAVLLKE 3245>XP_005264506 Length = 4884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PAVVLLSE 8 PA VLL E Sbjct: 3242 PAAVLLKE 3249>XP_006710717 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 856 PALRTLSEY 864>XP_005263523 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 983 PALRTLSEY 991>XP_005263522 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 1209 PALRTLSEY 1217>XP_006710716 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 1251 PALRTLSEY 1259>XP_005263521 Length = 1566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PAVVLLSEY 9 PA+ LSEY Sbjct: 1251 PALRTLSEY 1259>NP_001098717 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++LLS + Sbjct: 524 PALLLLSRF 532>NP_079018 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PAVVLLSEY 9 PA++LLS + Sbjct: 524 PALLLLSRF 532Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.136 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,961 Number of extensions: 677 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |