Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_002516 17 3301 NP_001095132 17 3301 NP_001229290 17 3301 XP_005270960 17 3301 NP_067041 17 4312 XP_006717271 17 4312 NP_065103 16 5631 NP_006695 16 5631 NP_001124384 16 5631 NP_073617 16 5631 NP_612372 16 5631 XP_006722230 16 5631 XP_006722229 16 5631 XP_005257838 16 5631 XP_005257837 16 5631 XP_005257836 16 5631 XP_005257835 16 5631 XP_005257834 16 5631 NP_076915 16 7355 NP_002445 16 7355 NP_001129950 16 7355 NP_037385 16 7355 NP_001018067 16 7355 NP_056965 16 7355 NP_075463 16 7355 XP_006719812 16 7355 XP_006718243 16 7355 XP_006718242 16 7355 XP_006718241 16 7355 XP_006718240 16 7355 XP_006714537 16 7355 NP_001073870 16 7355 NP_078966 15 9605 NP_001728 15 9605 XP_006723004 15 9605 NP_071433 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 128 PALNKMFCQ 136>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 89 PALNKMFCQ 97>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 128 PALNKMFCQ 136>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 128 PALNKMFCQ 136>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 89 PALNKMFCQ 97>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 89 PALNKMFCQ 97>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 89 PALNKMFCQ 97>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 128 PALNKMFCQ 136>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 PALNKMF Q Sbjct: 89 PALNKMFCQ 97>NP_002516 Length = 1219 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 PA NK++R Sbjct: 491 PAFNKLYR 498>NP_001095132 Length = 1151 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 PA NK++R Sbjct: 423 PAFNKLYR 430>NP_001229290 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 PA NK++R Sbjct: 359 PAFNKLYR 366>XP_005270960 Length = 914 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 PA NK++R Sbjct: 186 PAFNKLYR 193>NP_067041 Length = 104 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 P+LNK FR Sbjct: 49 PSLNKDFR 56>XP_006717271 Length = 101 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 P+LNK FR Sbjct: 46 PSLNKDFR 53>NP_065103 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ALNKMFRQ 9 A+N+ FRQ Sbjct: 372 AMNRQFRQ 379>NP_006695 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALNKMFRQ 9 ALN++F+Q Sbjct: 276 ALNRLFQQ 283>NP_001124384 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ALNKMFRQ 9 ALN++F+Q Sbjct: 308 ALNRLFQQ 315>NP_073617 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ALNKMF 7 ALNKMF Sbjct: 362 ALNKMF 367>NP_612372 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 581 PTLSKMWKQ 589>XP_006722230 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 369 PTLSKMWKQ 377>XP_006722229 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 369 PTLSKMWKQ 377>XP_005257838 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 417 PTLSKMWKQ 425>XP_005257837 Length = 658 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 417 PTLSKMWKQ 425>XP_005257836 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 581 PTLSKMWKQ 589>XP_005257835 Length = 869 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 629 PTLSKMWKQ 637>XP_005257834 Length = 870 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P L+KM++Q Sbjct: 629 PTLSKMWKQ 637>NP_076915 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALNKMFR 8 PAL K FR Sbjct: 175 PALRKHFR 182>NP_002445 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALNKMFR 8 PAL K FR Sbjct: 148 PALRKHFR 155>NP_001129950 Length = 227 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALNKMFRQ 9 P+LNK+ +Q Sbjct: 61 PSLNKLRKQ 69>NP_037385 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 47 LNEMFRE 53>NP_001018067 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 47 LNEMFRE 53>NP_056965 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 47 LNEMFRE 53>NP_075463 Length = 3013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PALNKMFRQ 9 P+LNKM + Sbjct: 2509 PSLNKMHHE 2517>XP_006719812 Length = 3019 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 PALNKMFRQ 9 P+LNKM + Sbjct: 2509 PSLNKMHHE 2517>XP_006718243 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 110 LNEMFRE 116>XP_006718242 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 110 LNEMFRE 116>XP_006718241 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 47 LNEMFRE 53>XP_006718240 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNKMFRQ 9 LN+MFR+ Sbjct: 110 LNEMFRE 116>XP_006714537 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALNKMFR 8 PAL K FR Sbjct: 175 PALRKHFR 182>NP_001073870 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 PALNKMFR 8 P+LN +FR Sbjct: 362 PSLNTVFR 369>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALNKMFR 8 ALN++FR Sbjct: 14356 ALNQLFR 14362>NP_001728 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 PALNKMFR 8 P L +MFR Sbjct: 56 PCLRQMFR 63>XP_006723004 Length = 6443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ALNKMFR 8 ALN++FR Sbjct: 6292 ALNQLFR 6298>NP_071433 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 PALNKM 6 PA+NKM Sbjct: 76 PAVNKM 81Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,042 Number of extensions: 641 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |