Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 20 509 NP_001277155 17 4312 NP_001277156 17 4312 NP_055998 17 4312 NP_001158136 17 4312 XP_006714675 17 4312 XP_006714673 17 4312 XP_006714672 17 4312 XP_006714670 17 4312 XP_006714669 17 4312 XP_006714668 17 4312 XP_006714667 17 4312 XP_006714666 17 4312 XP_005248555 17 4312 XP_006714665 17 4312 NP_000426 16 5631 NP_002038 16 5631 NP_002935 16 5631 XP_005259981 16 5631 XP_006715611 16 5631 NP_001548 16 7355 NP_001161770 16 7355 NP_004454 16 7355 NP_066983 16 7355 NP_060417 16 7355 XP_005246588 16 7355 XP_005246587 16 7355 NP_001170986 16 7355 NP_542189 16 7355 NP_001167539 15 9605 NP_001123368 15 9605 NP_542775 15 9605 NP_859052 15 9605 NP_055529 15 9605 NP_006827 15 9605 NP_057419 15 9605 XP_005276193 15 9605 XP_006724998 15 9605 XP_005262286 15 9605 XP_006724781 15 9605 XP_006724780 15 9605 XP_005262283 15 9605 XP_006721055 15 9605 XP_006721054 15 9605 XP_006721053 15 9605 XP_006721052 15 9605 XP_005271430 15 9605 XP_006710440 15 9605 NP_054735 15 9605 NP_859069 15 9605>NP_005179 Length = 906 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 PALLARRTL 9 PA+LARRTL Sbjct: 782 PAVLARRTL 790>NP_001277155 Length = 2417 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1879 ALLARRSL 1886>NP_001277156 Length = 2362 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1824 ALLARRSL 1831>NP_055998 Length = 2434 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1896 ALLARRSL 1903>NP_001158136 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 2085 ALLARRSL 2092>XP_006714675 Length = 2275 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1737 ALLARRSL 1744>XP_006714673 Length = 2362 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1824 ALLARRSL 1831>XP_006714672 Length = 2414 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1876 ALLARRSL 1883>XP_006714670 Length = 2425 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1887 ALLARRSL 1894>XP_006714669 Length = 2429 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1891 ALLARRSL 1898>XP_006714668 Length = 2429 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1891 ALLARRSL 1898>XP_006714667 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1894 ALLARRSL 1901>XP_006714666 Length = 2432 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 1894 ALLARRSL 1901>XP_005248555 Length = 2626 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 2088 ALLARRSL 2095>XP_006714665 Length = 2651 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 ALLARR+L Sbjct: 2113 ALLARRSL 2120>NP_000426 Length = 2321 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 PALLAR L Sbjct: 1505 PALLARGVL 1513>NP_002038 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PALLARRTL 9 P+LL RR+L Sbjct: 28 PSLLLRRSL 36>NP_002935 Length = 2347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PALLARRTL 9 PA+LA +TL Sbjct: 1377 PAMLAGKTL 1385>XP_005259981 Length = 2269 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 PALLAR L Sbjct: 1453 PALLARGVL 1461>XP_006715611 Length = 2342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 PALLARRTL 9 PA+LA +TL Sbjct: 1372 PAMLAGKTL 1380>NP_001548 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 P LL RRT+ Sbjct: 179 PVLLFRRTV 187>NP_001161770 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 P LL RRT+ Sbjct: 179 PVLLFRRTV 187>NP_004454 Length = 961 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PALLARR 7 P LLARR Sbjct: 40 PGLLARR 46>NP_066983 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALLARRT 8 P LL RRT Sbjct: 421 PVLLIRRT 428>NP_060417 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALLARRTL 9 PA++ RR+L Sbjct: 521 PAVMGRRSL 529>XP_005246588 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 P LL RRT+ Sbjct: 179 PVLLFRRTV 187>XP_005246587 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 P LL RRT+ Sbjct: 179 PVLLFRRTV 187>NP_001170986 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALLARRT 8 P LL RRT Sbjct: 388 PVLLIRRT 395>NP_542189 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 PALLARRT 8 P LL RRT Sbjct: 313 PVLLLRRT 320>NP_001167539 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>NP_001123368 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>NP_542775 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>NP_859052 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 PALLARRT 8 PAL ARR+ Sbjct: 18 PALRARRS 25>NP_055529 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 1123 PALLAR 1128>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 688 PALLAR 693>NP_057419 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 83 PALLAR 88>XP_005276193 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PALLARR 7 PAL ARR Sbjct: 76 PALAARR 82>XP_006724998 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 83 PALLAR 88>XP_005262286 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>XP_006724781 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>XP_006724780 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>XP_005262283 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLA+RTL Sbjct: 435 SLLAQRTL 442>XP_006721055 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 334 PALLAR 339>XP_006721054 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 1123 PALLAR 1128>XP_006721053 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 1123 PALLAR 1128>XP_006721052 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 PALLAR 6 PALLAR Sbjct: 1123 PALLAR 1128>XP_005271430 Length = 144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 PALLARR 7 PAL ARR Sbjct: 76 PALAARR 82>XP_006710440 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 PALLARRTL 9 P+LL+RR + Sbjct: 5 PSLLSRRAV 13>NP_054735 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ALLARRTL 9 +LLARR+L Sbjct: 401 SLLARRSL 408>NP_859069 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 PALLARRTL 9 P LLAR +L Sbjct: 58 PGLLARASL 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.141 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,226 Number of extensions: 524 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |